| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_4440 |
|---|
| Symbol | |
|---|
| ID | 7094359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011668 |
|---|
| Strand | - |
|---|
| Start bp | 27631 |
|---|
| End bp | 29157 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643467305 |
|---|
| Product | TraB pilus assembly family protein |
|---|
| Protein accession | YP_002364263 |
|---|
| Protein GI | 217980287 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 78 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 93 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAAC TCCTAGACTA CTTCAAAAAG GACCCCGAAG CCGACTTTGA GCAAGGCAGT
GCGTTAAATG AAGCCAATAA AAAACGCAAT TGGGTGATTG CAGGTGTGGG GGCAACGGTA
CTCGGTGCCC TCTATTTAGC GGGCGACGCC TATATGTCTG CCCCTAAACG TGCCCCCGAA
ACCGCAGCGG GCAATCCTAT CGATTTTGGT GCCGTGATTG ATAAAGATTT CACCGAGAAA
GACAATCAGT CTGCGCTCAC CGCACAACAA ATTGCCTTAG ATAAGCAGCA GAAAGCGATT
GATAAAATAC TGAGCAGCAT GCAAGCCATT GAGCGCAACA ATGAAGCTAA TCGCCTTGAT
TTAAAACGTA ATTTAGAGAC ATTCCAACTA ACCATCACTG AAAGAATTGA TGATAAGATT
AATGCAGCAA ACGCAAATGC AATGCAGCAT AGCAATGTCA CCGATGAATT TTCGACAGAG
GGCATCGATG CATCTGCCTA TCCCGTTAGG CAAAGCACAC GCTACTTAGG TGAACAAACG
CTGCCGCCAC GCCCGAGCGT GGGTGACGGA CAAAGCGGGT ATGCTGCCCC CTATCAAGGC
GGCGCTATCC CGCCACCTGC AACCCAAAAT GGCATCGATT CCTTTGCATT AAATTGGGAA
ACGCCAGAAG AAAACCTGCC AAAAAAACGC ACCCCTGAGA ACTATGTTCC TGCAGGTACG
TTTGTCACAG CTGTCGTTAC GGGCGGCGCA GATGCCAATG CGGGTGTGAA TGGCCAAGGC
GATACGGTGC CGATGGTATT CCAAACCACT AACCAAGGTG TACTCCCTAA CGGCAAGCCC
TCAAAGCTCA ATAACTGCAC GGTTCTCGGT GCAGCTTACG GGGAAATCTC ATCGAGTCGC
GGCATTGTGC GCACCACTCG CCTCAGCTGT ATTTTTGAAG ATGAAATCAT CGACATTCCA
GTCGAGGCGA CCGTATTTAA CTATGGCCGC AATGGTATTC GCGGTACTGC CATTATGAAG
AACGGCAAAA TCGTTCAGAT GGCAGGGATT AGCGGTATTT TGACGGGCAT TGGTGAGACA
GGTAAAGCAC TGAGCCAAAC CACATCGAAC TCAGCGCTAG GGTCAACCTC AAGCGTCAAT
GGCAGTGATG CACTGCTCAA CTTAGCCGGC AGTGCCAGTT CAAGCGTGGG TAGCAAGCTC
GCGGATTACT ACATCAAATT AGCTGAGCAA TACCACCCGA TTATTGAGCT CAATCCGGGC
AATACCGTCA ACATCGTGTT TTTGAAAGGC TTCCCGCTCG ATCCAGTTGG CATTCAAGAA
TACGAAGAAG CGCTAGCGCA GCAAGCCCAA AATCCTGTCA GTGCCACAGC GCAAATCCTC
AACACGATCA GCAACCCACT GTTAGAACAG ATGCCAGGGA ATATTAAGCC GCAGGCCCAA
GGCACAAACA CGCCTACACC ACAGCAGCAA TATAACCAAC AAGGCCAGCG CCCCCCTGTT
AACTCAGCCT TTGGCCGTGC GAATTAA
|
|---|
| Protein sequence | MKQLLDYFKK DPEADFEQGS ALNEANKKRN WVIAGVGATV LGALYLAGDA YMSAPKRAPE
TAAGNPIDFG AVIDKDFTEK DNQSALTAQQ IALDKQQKAI DKILSSMQAI ERNNEANRLD
LKRNLETFQL TITERIDDKI NAANANAMQH SNVTDEFSTE GIDASAYPVR QSTRYLGEQT
LPPRPSVGDG QSGYAAPYQG GAIPPPATQN GIDSFALNWE TPEENLPKKR TPENYVPAGT
FVTAVVTGGA DANAGVNGQG DTVPMVFQTT NQGVLPNGKP SKLNNCTVLG AAYGEISSSR
GIVRTTRLSC IFEDEIIDIP VEATVFNYGR NGIRGTAIMK NGKIVQMAGI SGILTGIGET
GKALSQTTSN SALGSTSSVN GSDALLNLAG SASSSVGSKL ADYYIKLAEQ YHPIIELNPG
NTVNIVFLKG FPLDPVGIQE YEEALAQQAQ NPVSATAQIL NTISNPLLEQ MPGNIKPQAQ
GTNTPTPQQQ YNQQGQRPPV NSAFGRAN
|
|---|
| |