Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_2382 |
Symbol | |
ID | 7094304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011667 |
Strand | - |
Start bp | 42031 |
End bp | 45150 |
Gene Length | 3120 bp |
Protein Length | 1039 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643701069 |
Product | heavy metal efflux pump, CzcA family |
Protein accession | YP_002364210 |
Protein GI | 217980160 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0207882 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.000762741 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCAAAT GGCTACTCGA CAACAGTCTG GGCAACCGGC TGCTGGTGAT CATCGCCAGC CTGGTGCTGA TGGCCTACGG CGCGTTCACG CTCACACGCA CGCCCGTGGA CGTGTTCCCG GACCTCAACA AGCCGACGGT CACGATCATG ACCGAATCCG GCGGCATGGC GGCGGAGGAG GTCGAACAGC TCATCACCTT CCCGCTCGAA ACGACAATGA ACGGGCTACC CGGGGTGGAG TCGGTGCGCT CCATCTCCAG CGCGGGGCTG TCCTTCGTCT ATGTGACCTT CGAGTGGAGC ACGGAGATTT TCCGCGCCCG GCAGATGGTG TCGGAGCGCC TGTCGGCGAT GGAGGAAGGC CTGCCGGCGG ACGTGATTCC GCGCATGGGG CCGATTAGCT CCGTGATGGG CGAGATCATG CAGATCGCGA TCCCGATCGA TACCGCTAAG ATCTCGCCGA TGCAGGTGCG CGAATACGCT GACTGGGTGC TGCGTCCGCG TCTCATGGCC ATCCCCGGTA TCGCGCAGGT CATCCCGATC GGCGGAGAAG TGCGGCAGTT CCAGGTGCAG CCAGATACGC GGCGCATGGC GGAACTCGGC ATTTCGCTGG AACAGATGGA AGCGGCGATC CGCGGCTTTT CGTCGAACAC CTCGGGCGGC TTCCTCGAAC TCACCGGGCG TGAATACCTG ATCCGCAACC TCGGACGCAC CTCGAGCCTG GAGGATCTGA AGAATCTCGC GATCACGGCA CGCGACGGTC AGCCGATCCT GCTGCGCCAG ATTGCCTCCG TGACGTTCGC ACCGGCGCTG CGCCGCGGCG ATGCGGGTTT CGAGGGCAAA CCGGCAGTCA TTCTCGGTAT CCAGAAGCAG CCGACCGCGG ACACCATTCA CCTCACCCGC TCGATCGAGG CCGCGCTCGA CGAGATGAAG AAATCGCTGC CCGCCGGCAT GGAAGCGCCG CAGGTTACGT TCCGGCAGGC GAGCTTCATC GAGGCATCGA TCGGCACGCT GCAGGGCAAG CTGATTGGCG CCTCGGTGTT CGTCGCGGCG ATCCTGTTCT TCTTCCTCGG CACGCTGCGC CCGACGGTGA TCGCGCTCAC CGCGATCCCG GTGTCGATCT TCATGACGGC GCTGGTGTTC AAGTATTTCG GTCTGTCGAT CAACACGATG ACGCTCGGGG GGCTGGCGAT TGCGATCGGC GGCCTGGTCG ACGACGCGGT GGTGGGCGTC GAGAACGTGT TGCGCCGGCT GAAGGAGGAT CGCGCGAAGC ATCATGACCA TCGCCTGCAC CCGATCGAAC TCGTGGCTCA TGCAACGATG GAGGTGCGCT CGGCCATCCT CTACGCGACG ATCATCATCG TGCTGGTGTT CCTGCCGTTG TTCGCGCTGC CCGGGATGGA GGGGCGGCTG TTCGTGCCGC TCGGCGTGGC ATTCATCGTC TCGACGTTGG CGTCGCTGGT CGTTTCGGTA ACGGTGACCC CGGTCCTGTC CTTCTATCTG CTGCCGCGCA TGAAGTCCCT CGACCATGGC GACACGCGCG TACTTGCCTG GCTCAAGGCG CGCTATCGCA ACGGTCTGCA GGCCGTCCTC GAGCGGCCCA GGGCGGCCGT GTTCGCCGGC ACAGTCGCGG TGATCGTCGC GGCCGCCGCC GTGCCCTTCT TTCCGACCAC GTTTCTGCCG CCCTTCAACG AAGGCACCCT GCTGATCGGC ATGCGGCTCA ACCCGGGGGT GACGCTCGCC GAGTCCACCG CGCTTGCGCA ACAGGCGGAG GTGCTGGTGA AACAGGTGCC GGAGGTCACG CACGTTGGTC GTCGCAGCGG ACGTGCGGAA CTCGATGAAC ATGCTGAAGG CGTGCACGTC AGCGAGCTCG ATGTCGGGCT CAAGCCGGCG TCAGAACTCA CCCGTTCGAT GGGGGAGATC GCCGCCGACA TCCGCGCCCG GCTCGTGAAC CTGCCCGCTG CGATCGCGAT CGGCCAGCCG ATCTCACACC GCATCGACCA CATGCTCTCG GGCGTGCGTT CGCAGATCGC GATCAAGATC TTCGGCGAAG ACCTCGACAC GCTGCGGGGG CAGGCCGATG CGCTGCGGGC GCGGCTGGCC GGCATCCCCG GACTCGCGGA TCTGGAAATC GAGAAGCAAG TGCTCGCGCC GCAGATCAAG GTGCGCATCG ACTATGCCGC AGCGGCCCGC TATGGCGTGC CGGCACCGCA GATCCTGGCC GCGCTGCAGA ACCTCGTCGA GGGCGAGAAA GTCACCCAGA TCGTCGAAGG TGGAAGGCGT TTCGCGCTGG TCGTGCGCCT GCCCGAATCG GCGCGTTCGG TCGAGGGGCT CGCGCAGATC CTCATCGAAA CGCCCACCGG CCACGTCCCG TTGTCGAAAC TCGCGTCGAT CGAGGATGGC GACGGGCCGA ACCAGGTCAG CCGCGACGAC GGCAAGCGCC GCATCGTGCT GTCGGCCAAT GCGCAGCAGC GCCCGCTCTC GGAAATCGTC GAGGACATCC GCGCCGTGGT GGCCGACATG AAACTGCCCG AAGGCTACTT CATCACGCTC GGTGGGCAGT TCCAGGCACA GGAAGAAGCG TCGCGTCTCG TGGGGCTGCT GTCGATCGTG TCGCTCGTGC TGATGTTCGT CGTGCTCTAC AGCCGCTACA AGTCGGTGCG TCTCTCGGCG CTGATCATGG CCAACATTCC GCTCGCGCTG GTGGGCGCAG TGATCGGCCT GTGGATCTCC GGCCAGCCCT TGTCGGTCGC GGCGCTCATC GGCTTCATCA CGCTCGCCGG CATCTCGGTG CGTAATGGAA TCCTGAAGGT CAGCCACTAC ATCAATCTGA TGCGCATCGA AGGCGAGAGC TTCGATCACC AGATGATCCT GCGCGGCTCG CTGGAACGGC TATCGCCGGT GCTGATGACG GCGCTGGTGA CGGCCTTTGC GCTGGCACCG CTGCTGTTCG AGGCCGAACG CCCGGGTACC GAGATCCTGC ACCCGGTCGC GGTGGTGATC TTCTCGGGGC TCATCAGCTC GACGCTCCTC GATACCTTCC TCACCCCGGC GATGTTCTGG CTTTTCGGCC GCCGCGACGT CGAGCGCCTG CTCAACGACC GCAATGCCGA AGCGTTCTGA
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Protein sequence | MFKWLLDNSL GNRLLVIIAS LVLMAYGAFT LTRTPVDVFP DLNKPTVTIM TESGGMAAEE VEQLITFPLE TTMNGLPGVE SVRSISSAGL SFVYVTFEWS TEIFRARQMV SERLSAMEEG LPADVIPRMG PISSVMGEIM QIAIPIDTAK ISPMQVREYA DWVLRPRLMA IPGIAQVIPI GGEVRQFQVQ PDTRRMAELG ISLEQMEAAI RGFSSNTSGG FLELTGREYL IRNLGRTSSL EDLKNLAITA RDGQPILLRQ IASVTFAPAL RRGDAGFEGK PAVILGIQKQ PTADTIHLTR SIEAALDEMK KSLPAGMEAP QVTFRQASFI EASIGTLQGK LIGASVFVAA ILFFFLGTLR PTVIALTAIP VSIFMTALVF KYFGLSINTM TLGGLAIAIG GLVDDAVVGV ENVLRRLKED RAKHHDHRLH PIELVAHATM EVRSAILYAT IIIVLVFLPL FALPGMEGRL FVPLGVAFIV STLASLVVSV TVTPVLSFYL LPRMKSLDHG DTRVLAWLKA RYRNGLQAVL ERPRAAVFAG TVAVIVAAAA VPFFPTTFLP PFNEGTLLIG MRLNPGVTLA ESTALAQQAE VLVKQVPEVT HVGRRSGRAE LDEHAEGVHV SELDVGLKPA SELTRSMGEI AADIRARLVN LPAAIAIGQP ISHRIDHMLS GVRSQIAIKI FGEDLDTLRG QADALRARLA GIPGLADLEI EKQVLAPQIK VRIDYAAAAR YGVPAPQILA ALQNLVEGEK VTQIVEGGRR FALVVRLPES ARSVEGLAQI LIETPTGHVP LSKLASIEDG DGPNQVSRDD GKRRIVLSAN AQQRPLSEIV EDIRAVVADM KLPEGYFITL GGQFQAQEEA SRLVGLLSIV SLVLMFVVLY SRYKSVRLSA LIMANIPLAL VGAVIGLWIS GQPLSVAALI GFITLAGISV RNGILKVSHY INLMRIEGES FDHQMILRGS LERLSPVLMT ALVTAFALAP LLFEAERPGT EILHPVAVVI FSGLISSTLL DTFLTPAMFW LFGRRDVERL LNDRNAEAF
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