| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2379 |
|---|
| Symbol | |
|---|
| ID | 7094301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011667 |
|---|
| Strand | - |
|---|
| Start bp | 40518 |
|---|
| End bp | 41075 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643701066 |
|---|
| Product | Ankyrin |
|---|
| Protein accession | YP_002364207 |
|---|
| Protein GI | 217980157 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0666] FOG: Ankyrin repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 71 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.000440604 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCATGACG ACGTCCATCA CGAAGCCTGG CGCGATCGAG TGGCCCCGGA ACTGCTCGAC
GCGGTTCGCC AGGGCAAGAT CCCGGAAGTG CTGAGATGGC TGGAGGACGG ACTTCCCGCC
GATTGGCAAG ATACCGAGGG GTGCAGCTTG ATCTTCCTGG CGGCATATCA CCGTCGGTGG
GCCGTTATTG ACGGCCTGTT GGCGCACGGC GCATCAGTCG ACCTGCCCGA TCGTCGGGGA
TGGACGCCGC TCTTCTGGGC CGCTTTCAAC GGCCATGCGG ACATCGTTTC ATTCCTGATC
GGCCGTGGCG CCAATCCAGA CGTGCGGAAC GAGGACGGGG AGTGGCCCTT GTTCTGGGCC
GTCTACAAGG GGCACACAGC AGTTGTCCGG CATCTCCTGA TCGGCGGTGC GAAGCGGAAC
CAAATCGATG CGGACGGACA CGACGAGCTC TGGCTCGCAA AAAATTTGGG CCGACAGGAC
ATCGTTGCCA TCTTGGAGGG GCCTCGAGGC CCGCGCCCAA ACCGTGCCCT GCGTGGGACT
TCGGACGAGG GCATTTGA
|
|---|
| Protein sequence | MHDDVHHEAW RDRVAPELLD AVRQGKIPEV LRWLEDGLPA DWQDTEGCSL IFLAAYHRRW
AVIDGLLAHG ASVDLPDRRG WTPLFWAAFN GHADIVSFLI GRGANPDVRN EDGEWPLFWA
VYKGHTAVVR HLLIGGAKRN QIDADGHDEL WLAKNLGRQD IVAILEGPRG PRPNRALRGT
SDEGI
|
|---|
| |