Gene Tmz1t_2354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2354 
Symbol 
ID7094276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011667 
Strand
Start bp18863 
End bp19900 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content65% 
IMG OID643701043 
Producthelix-turn-helix, type 11 domain-containing protein 
Protein accessionYP_002364184 
Protein GI217980134 
COG category[L] Replication, recombination and repair 
COG ID[COG3415] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value0.309704 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA TCGATGCACG CAAGCTGGGT CCTGAAGGGC GCGAGACGCT GCGCAAGATG 
GTGCTGCGCC TGAACACGCA GTCCGGAATG ACGGGCGTGG AGTTGGCGAA GATCGCCGGA
GTCCATGTGC GCACGGTGCA GGCGTGGCTG AGGAAAGCGC GCACGGACGG TGTCGGGGCG
TTGGTCGAGA AGACGCGAGG CCGTCCCTAT GGGGCCTGCC GGAAGCTGAC GATGGCGCAG
GAGGTTTGGG TGCGGCAGCG CATCGTGGCT GCGGTGCCCG AACAGCTGAG CTTGCCTTTT
GCCCTGTGGA CCCGGCGGGC GATCCAGGCC TTGGTGGAGC AGCAATTTGG ACTGCAGTTG
TCCGATCGCC TCGTGGGCAA GTATCTGAAG CGCTGGGGCT ACACCGCCCA GCGCCCGGTC
AAGAAGGCGA TGGAGCAGCG CAGCGATCTG GTCCAGGCTT GGCTGCGCGA GCGCTACCCG
GCCATTGCCA CGCGCGCCAA GGCCGAAGGC GCGGTCATTT ACTGGGCGGA CGAAACGGCG
GTCAAGGAAG ATACGAACTG GATTCGAGGC TTTGCGCCGG CCGGCCGCAC GCCCGTGCTC
GAGGCGTCGG CCCGCTGGGC CAAGCTATCG ATGATCTCGG CGATCACCAA CCGGGGCGAG
ATCGCTTTCC AGATCGTCGA GGGCACGATC AACGCCGAAC GCTTCATCGA GTTTCTCGAG
CGACTGATCG CCAGTGCGGC GAGCAAGGTG TTCCTGATTG TCGATAACCT GCGGGTGCAC
CACGCCAAGC TCGTCCAGGC CTGGGTCGAG ACGCGTCGTG CGCAGATCGA GCTGTTCTAC
TTGCCGCCCT ATGCGCCCGA GTCCAATCCG GACGAATACC TGAATCACGA CTTCAAGACC
GCGCTGCGCC TGGAGCCGCC CAGCCGCGAT GATTCGCAGC TCTTGAAGAA GGCCCACGCC
ATCATGGACC GCATCGCCTC GCTCCCCGAG CGTGTCCGGT CCTACTTCGA ACACCCGGCC
GCTGCGTATG CTGCGTAG
 
Protein sequence
MEKIDARKLG PEGRETLRKM VLRLNTQSGM TGVELAKIAG VHVRTVQAWL RKARTDGVGA 
LVEKTRGRPY GACRKLTMAQ EVWVRQRIVA AVPEQLSLPF ALWTRRAIQA LVEQQFGLQL
SDRLVGKYLK RWGYTAQRPV KKAMEQRSDL VQAWLRERYP AIATRAKAEG AVIYWADETA
VKEDTNWIRG FAPAGRTPVL EASARWAKLS MISAITNRGE IAFQIVEGTI NAERFIEFLE
RLIASAASKV FLIVDNLRVH HAKLVQAWVE TRRAQIELFY LPPYAPESNP DEYLNHDFKT
ALRLEPPSRD DSQLLKKAHA IMDRIASLPE RVRSYFEHPA AAYAA