Gene Msil_3919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_3919 
Symbol 
ID7092616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp4297383 
End bp4299014 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content66% 
IMG OID643467204 
ProductABC transporter related 
Protein accessionYP_002364162 
Protein GI217980015 
COG category[R] General function prediction only 
COG ID[COG4172] ABC-type uncharacterized transport system, duplicated ATPase component 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCGG CTGCCGCCCC CCTGCTCGAC ATTCGCGATC TCTCCGTCTC CTTCCGCGCC 
GGCGCGGCGC GGACGCGCGC GGTCGACGGC GTCTCTTTTG CGCTTGAGAG CGGCCGCACG
CTGGCGCTTG TCGGCGAATC GGGCTCGGGC AAATCGGTCA CTGCGCTCTC GATCCTGCGG
CTGCTGGCGC CCGGCGCCGA AACGCAGGGA AACGCCCTGT TCGACGGCGA GGACCTGCTG
GCCGCGTCCG AGGAGCGGCT TCGCGCCATC AGGGGCGCGC GGATCACCAT GGTGTTCCAG
GAGCCGATGA CATCACTTAA TCCGCTGCAC AGCATCGAAA AGCAGATCGG TGAAATTCTG
GAGCTGCACG GCGCCCGCGG CGCCGAAAAA ATCCGCGCCC GGGTCGTCGA GCTTCTCGGC
GAGGTGGGCA TCCCCGATCC CGCCGATCGG CTGGCCGCCT ATCCGCATCA GCTGTCGGGC
GGCCAGCGCC AGCGCGTCAT GATCGCCATG GCGCTCGCCA ACCGCCCGGA TCTCTTCATC
GCCGACGAGC CGACGACCGC GCTCGACGTG ACCGTGCAGG CGCAGATCCT CGACCTCTTG
AAACGGCTGC AGGCGCGCCA TGGCATGGCG ATGCTGTTCA TCACCCATGA CCTGAATATC
GTGCGCAAAA TCGCCGACGA CGTCGCCGTC ATGCAGAAGG GGCGCATCGT CGAAACGGGG
CCGGTCGCGA CGATTTTTTC CGCGCCGCGC CATCCCTATA CCTGCGCGCT GCTCGCCGCC
GAGCCCAAAG GCGCGCCGCC GCCGTTTAAC GCTGCGGCTC AGCCCATCGT CAGCGCCGAC
AACATTAAAG TCTGGTTTCC GATCAAGCGC GGCTTTTTTC GCCGCACCAT CGGCTACGTT
AAGGCGGTCG ACGGGGTCAG CGTCACCGTG CGGGAAGGCG AGACGGTCGG CGTCGTTGGG
GAATCGGGCT CGGGCAAGAC CACGCTTGGC CTCGCCTTGC TGCGGCTGAT CCGCTCGGAG
GGCGCTATCG TCTTCCTCGG CCAGCGCATT GACGGGTTGC GCTTCAAGGA GCTGCGGCCG
ATCCGGCGCG ACATGCAGAT CGTGTTTCAG GATCCCTATG GCTCGTTGTC GCCGCGCCTG
CCGGTCGCCG ATATCGTCGC GGAAGGGCTC GGCGTACAGG ACAAGAGCCT CAGCTACAGC
CAAAAACGAG AGATTGTCGC CCGGGCGCTC GCCGACACCG GCCTCGATCC GGCGGCGATG
GACCGCTATC CGCATGAATT TTCAGGCGGC CAGCGTCAGA GAATCGCCAT CGCCCGCGCC
ATGGTGCTTG AGCCGAAATT CATCGTTCTC GACGAGCCGA CCTCTGCGCT CGACATGTCG
GTTCAGGCGC AGATCGTCGA TCTTTTGCGC GATCTGCAGC GCCGCCGCGG CCTCGCCTTT
TTGTTCATCA GCCATGATCT GCGCGTCGTG CGCGCGCTGG CGAGCGAAAT CATCGTCATG
CGCGGCGGCA AGCTGATCGA ATCGGGTCCC GCCGCCGAAC TGCTGGCGCA TCCAAAGAGC
GACTATACCC GCGCTCTGTT CGCCGCCGCT TTCGACATGC GGGCGGAAGA GGGGTCCGTG
ATTCCCGTTT AG
 
Protein sequence
MIPAAAPLLD IRDLSVSFRA GAARTRAVDG VSFALESGRT LALVGESGSG KSVTALSILR 
LLAPGAETQG NALFDGEDLL AASEERLRAI RGARITMVFQ EPMTSLNPLH SIEKQIGEIL
ELHGARGAEK IRARVVELLG EVGIPDPADR LAAYPHQLSG GQRQRVMIAM ALANRPDLFI
ADEPTTALDV TVQAQILDLL KRLQARHGMA MLFITHDLNI VRKIADDVAV MQKGRIVETG
PVATIFSAPR HPYTCALLAA EPKGAPPPFN AAAQPIVSAD NIKVWFPIKR GFFRRTIGYV
KAVDGVSVTV REGETVGVVG ESGSGKTTLG LALLRLIRSE GAIVFLGQRI DGLRFKELRP
IRRDMQIVFQ DPYGSLSPRL PVADIVAEGL GVQDKSLSYS QKREIVARAL ADTGLDPAAM
DRYPHEFSGG QRQRIAIARA MVLEPKFIVL DEPTSALDMS VQAQIVDLLR DLQRRRGLAF
LFISHDLRVV RALASEIIVM RGGKLIESGP AAELLAHPKS DYTRALFAAA FDMRAEEGSV
IPV