Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_3912 |
Symbol | |
ID | 7092609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 4290270 |
End bp | 4291136 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643467197 |
Product | Prephenate dehydratase |
Protein accession | YP_002364155 |
Protein GI | 217980008 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0077] Prephenate dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTCC AGAAAATCGC CTATCAGGGC GAGCCCGGCG CCAATTCCGA GATCGCCTGC CGCACCGTCT ATCCGGGCGC GACGCCGATT GCCTACGACA CCTTCGAAGA TGCGCTCAGC GCCATCGCCG AGGGCGAGGC CGAACTCGGC ATGATTCCGA TCGAGAATTC GATCGCCGGC CGCGTCGCCG ATATTCACCA TCTGCTGCCG CGCGCCAACC TTCATGTCAT CGGCGAGCAT TTCATGCCGA TCGACTTTCA GCTGCTCGGC CTCAAGGGAG CCAAGCTTGG CGACGTCAAA TCGGTCTACA GCCACGTTCA CGCGCTGGGC CAATGCCGCA AGATCATTCG CGAATTGCGC CTTTTTCCGC ATGTCGCCGC CGATACGGCA GGCTCGGCGC GCCAGGTCGC CGAATGGGCC GATCCCTCAA AGACCTCGAT CGCCACCTCG CTCGCCGGCG AAATCTATGG CCTCGAGGTT CTGGCGCGGG ACATCGGCGA CGAGCCGAAT AATACGACGC GCTTCGTGAT CCTGTCGCGG ACGCCCGCCT GGGCTGCGCC TTCCACCGCC GCGCCGACCG TCACGAGTTT TGTCTTCCGG GTCCGCAACG TGCCGGCCGC GCTTTACAAG GCGCTCGGCG GCTTCGCCAC CAATGGCGTC AATATGACCA AGCTGGAAAG CTATATGGTC GGAGGGCATT TTACCGCGAC GCAATTTCTG GCCGACGTCG ACGGCCACCC CGAGGAGCCG GCGCTCGCCC GCGCGCTCGA GGAGCTGGCG TTTTTCTGCA AGGAGCTGAA GATTTTGGGG GTGTATCCGG CGCATCCGTT CCGGATCGAG AGCCGCGCCA ATGGTTGGGA CGGCTAG
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Protein sequence | MTVQKIAYQG EPGANSEIAC RTVYPGATPI AYDTFEDALS AIAEGEAELG MIPIENSIAG RVADIHHLLP RANLHVIGEH FMPIDFQLLG LKGAKLGDVK SVYSHVHALG QCRKIIRELR LFPHVAADTA GSARQVAEWA DPSKTSIATS LAGEIYGLEV LARDIGDEPN NTTRFVILSR TPAWAAPSTA APTVTSFVFR VRNVPAALYK ALGGFATNGV NMTKLESYMV GGHFTATQFL ADVDGHPEEP ALARALEELA FFCKELKILG VYPAHPFRIE SRANGWDG
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