Gene Msil_3860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_3860 
Symbol 
ID7092556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand- 
Start bp4227986 
End bp4228432 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content64% 
IMG OID643467145 
Product3-dehydroquinate dehydratase 
Protein accessionYP_002364104 
Protein GI217979957 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0470796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCG TCCATTGCCT GAACGGGCCA AACCTCAATC TGCTCGGATC GAGGGAGCCG 
GAGATTTACG GCGCGCAGAC GCTCGCGGCG ATCGAGTCAC GCCTTGCCGC GACCTGCGCC 
GAGCGCGGCG TCACGCTTCG CTTCCGCCAG AGCAATCATG AGGGCGACCT GATCTCCTGG 
GTGCAGGACG CGGGGCTCGC CGGCGAGCCG ATCATCCTCA ACGCCGGCGC CTTGACGCAT 
ACCTCGATCG GCCTTCATGA CGCGATCAAG GGCGCGAAGG CCAAGGTCGT CGAGGTCCAT 
CTCTCCAATG TCCACGCCCG CGAGGAGTTT CGCCGTCACT CCTATATCGC CCCCGTCGCC 
GAGGGCGTGA TTTCGGGCTT CGGCGTCTTG TCCTACACGC TCGCCCTCGA CGCCTTGATC 
GCTCTCACAA CCGTCAGCGA AAGATGA
 
Protein sequence
MKTVHCLNGP NLNLLGSREP EIYGAQTLAA IESRLAATCA ERGVTLRFRQ SNHEGDLISW 
VQDAGLAGEP IILNAGALTH TSIGLHDAIK GAKAKVVEVH LSNVHAREEF RRHSYIAPVA 
EGVISGFGVL SYTLALDALI ALTTVSER