Gene Msil_3838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_3838 
Symbol 
ID7090766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand+ 
Start bp4203506 
End bp4204555 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content69% 
IMG OID643467123 
ProductUDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase LpxD 
Protein accessionYP_002364082 
Protein GI217979935 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID[TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.00967393 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATGATC CGATCTTCTT CCTGCGGGCA AAGCAGCTGT CGCTCGCCGA ACTCGTCGCC 
CTGACTGGAG CGCGTCCCGC AGACGGCGCC GATCTGTCGC CGCAGGTCTA TGGCGGCGCG 
CCTTTCGAAG AGGCGGAGCC AGGCGATGTC ACCTATTTCG CCCATCCAAA ACGGCTTCAT 
CGGCTGCCCG ACACCAATGC AACCGCCTGT TTTGTTGCCG AGCGCTACGC CTTCGCCGCG 
CCGCGCGGGA CGGCCGCGCT CGTCACGGAC CAGCCGGAAC AGGCTTTCGC GCAGGCCCTC 
GCGGCGATGT ATCCGTCGGC CCTGCAAGAG GCTTCGCTCT TCGCCGCAGC GGGGGTCAAT 
CCCGGCGCCA GCGTTCATCC GGAGGCGCGG CTCGAGCCGG GCGTCGCGGT CGATCCCGGC 
GCGGTGATCG GGCCGCGCGC GGAGATCGGC TCCGGTACGA TCGTCGGCGC AAATAGCGTG 
ATCGGTCCCG GCGTCAGGAT CGGGCGCGAT TGCTCCATCG GGGCGCAGGT CACGATCGTC 
AACGCGCTGA TCGGCAACCG GGTCAAACTG CGCCCCGGCG CACGCATCGG CCAGGCCGGA 
TCGCCGCAAA ATGCCGCCCG CGCCGCGACG CCGCAGATCG GGCGCGTGAT CATCCAGGAC 
GACGTGGAAA TCGGCGCCAA CGCCGCAATC GATCGCGGCT CGGGCCGCGA CACCGTGATC 
GGCGAGGGCG CGACCATCGG CAATCTGGTC GAAATCGGCG CCGACGTGAC AGTGGGGCGC 
AAATGCCGGA TCGGAGCGCT GGCTGTCATC GGCGGATCGG TTGAGATCGG CGATTTCGCG 
CGGATCGGCG CGCAGGCCGA CGTCGGCGAA CATCTCCACA TCGGATTTTC AGCGCATATT 
CTCCCGCAAG CGGGGGTCGC AAGCGATGTG CCGCCTTTTG CGCGCTATGC CGGGTCGCCG 
GCGCGCCCGC TCCTGCGCGG GCTGCGCGCT CTGGCGCTGG TCGAGCGCCT TATCCGGCCG 
AAGCCGCCGG ATCGCGGACG AGGCCAATAA
 
Protein sequence
MNDPIFFLRA KQLSLAELVA LTGARPADGA DLSPQVYGGA PFEEAEPGDV TYFAHPKRLH 
RLPDTNATAC FVAERYAFAA PRGTAALVTD QPEQAFAQAL AAMYPSALQE ASLFAAAGVN 
PGASVHPEAR LEPGVAVDPG AVIGPRAEIG SGTIVGANSV IGPGVRIGRD CSIGAQVTIV 
NALIGNRVKL RPGARIGQAG SPQNAARAAT PQIGRVIIQD DVEIGANAAI DRGSGRDTVI 
GEGATIGNLV EIGADVTVGR KCRIGALAVI GGSVEIGDFA RIGAQADVGE HLHIGFSAHI 
LPQAGVASDV PPFARYAGSP ARPLLRGLRA LALVERLIRP KPPDRGRGQ