| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3835 |
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| Symbol | |
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| ID | 7090763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 4197935 |
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| End bp | 4199173 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643467120 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_002364079 |
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| Protein GI | 217979932 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0104927 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAG TCGTTCAACT GCGGCCCTCC CGCTCCGGCG AGGCGAGTTC GCCGGACGCC
GATTCGCGCC GCGTCGTGCT GCTCGGCGCG ACCGGCTCCA TCGGCCGCTC GACCGTCGAG
ATCATCAACG GCGCCAACGG CGCCTTCAGC GTGGCCGCCG TCGCCGGCGG CAGCGACGCC
AAGGCGCTCG CCGCCGTCGC CATCGAGCTT GGCGCGGAAT TCGCCGCCCT TGCGGATCCG
TCCGGCTATG CGGATTTGAA AGCGGCGCTG TCTGGAACCG CGATCGAGGC GGCGGCCGGT
CCCGAGGCGG TGATCGAAGC GGCGCTGCGG CCGGCCGACA TCGTTGTCGG CGCCATCGCC
GGCGCCGCCG GCGTCGCGCC GACCTTCGCC GCGCTGGCCG CCGGGCGCAT CATCGCGCTC
GCGAATAAGG AATGCCTCGT CTGCGCCGGG CCGGCCTTCA TGCGTCAGGC GGCCGCGTCG
GGAACCCGGC TTTTGCCGGT CGACAGCGAG CACAACGCCA TTTTTCAGGC GATGGGCGAC
GCCGAATTGT CGTCCGTCGA GATGATCACC CTGACGGCCT CCGGCGGACC ATTCCGAACC
TGGAGCGTCG AGGCCATCGC CGCCGCGACG CCGGAGCAGG CGCTCGCCCA TCCAAACTGG
TCGATGGGAC CGAAAGTCAC GATCGATTCG GCCGGCCTGA TGAACAAGGG GCTCGAAGTC
ATCGAGGCGC ATTATCTGTT CGGGATCGAG ACGGCGCGGC TCGACGTGCT GGTTCACGCG
CAATCGGTGG TGCACGGCCT CGTCGCCTTC TCAGACGGAT CGGTCTCGGC CGGACTCGCC
GCGCCCGACA TGAAGGTGCC GATCGCCCAT TGCCTGTCGC ATCCGCGGCG TCTCGTTACC
AAGGCGCGCC GGCTCGATCT CGCGGCGATC GGCCAGCTCA CCTTCGAGCG TCCGGATTTT
AACCGCTTTC CGGCCCTGCG CGTCGCCCTC GACGCCTTGC GCGCCGGCCG CGGTCTTCCT
ACTGTATTGA ACGCCGCCAA TGAGATTGCC GTGGAGGCGT TCCTGAAGCG GCGCATTTCG
TTCCACGAGA TCGCCAAAAT CGTCGAGCAG GCTTGCGAGG CGGCGCTGTC CGATGGCGTC
GCGCGCGAGC CGGAGACGAT CGACGAGGCG CTCGCCATTG ATTTCGCCGT GCGCGAACGC
ACGCGCGCCC GTTTGCCGGG GACCGCGGCG GCGTCATAA
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| Protein sequence | MKKVVQLRPS RSGEASSPDA DSRRVVLLGA TGSIGRSTVE IINGANGAFS VAAVAGGSDA
KALAAVAIEL GAEFAALADP SGYADLKAAL SGTAIEAAAG PEAVIEAALR PADIVVGAIA
GAAGVAPTFA ALAAGRIIAL ANKECLVCAG PAFMRQAAAS GTRLLPVDSE HNAIFQAMGD
AELSSVEMIT LTASGGPFRT WSVEAIAAAT PEQALAHPNW SMGPKVTIDS AGLMNKGLEV
IEAHYLFGIE TARLDVLVHA QSVVHGLVAF SDGSVSAGLA APDMKVPIAH CLSHPRRLVT
KARRLDLAAI GQLTFERPDF NRFPALRVAL DALRAGRGLP TVLNAANEIA VEAFLKRRIS
FHEIAKIVEQ ACEAALSDGV AREPETIDEA LAIDFAVRER TRARLPGTAA AS
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