| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3793 |
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| Symbol | |
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| ID | 7090721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 4156387 |
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| End bp | 4158540 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643467078 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_002364037 |
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| Protein GI | 217979890 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.97477 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGCGG AGACGATAAA ATCCCGGATA CGCGAAGGCC TGCCCTATCC GATCGGCGCG
ACATGGGATG GCGAGGGCGT TAATTTCGCG CTCTTTTCGG CAAATGCGAC GAAGGTCGAG
GTCTGCCTGT TCGATTCCGA GGGCAAGACC GAACTCGAGC GCGTGGCGCT CCCTGAATAT
ACTGACCAGA TCTATCATGG CTGGCTGCCC GACGTCGGGC CGGGACAGGT CTATGGCTAT
CGCGTTCATG GTCCCTATGA GCCCAACGCC GGCCATCGCT TCAATCCCAC AAAACTGCTG
CTCGACCCCT ATGGCCGAGC CCATATGGGC GACCTCAAAT GGGATCCGGC GGTGTTCGGC
TATACGATTG GCCACGCAGA CGGCGACCTC TCCTTCGATG AGCGCGACAG CGCCCCCTTC
ATGCCGAAAT CGATCGTCGT CGATCCGAAT TTCGACTGGC GCGGGCAGCC GAGGCGCAGC
CCCGTCGCGT GGGATCGGAC CATCTTTTAC GAAGCGCATG TGCGCGGCTA TACCAAGCTC
CATCCGAAGA TCCCCGAGGC GCTGCGCGGG ACCTATGCCG GCCTCGGCGA GAAGCAGGTC
ATCGACTACA TCAAGTCGAT TGGCGTGACC TCGATCGAGC TGTTGCCGAT CCACAGCTTC
ATCAATGACG ACTATCTGCT CGACAAAAAT CTCACCAATT ATTGGGGCTA TAATACAATC
GGCTTCTTCT CGCCGGACCC GCGCTATGCG GCCGATCGCG CCAATTGCCT GCGCGAGTTC
AAGGAGATGG TTTCGCGATT CCATGACGCG AGGCTCGAGG TCATTCTCGA CGTCGTTTAC
AATCACACGG CCGAAGGCAA TGAGCGGGGT CCGACGCTGT CTTTTAAAGG CATCGACAAC
GCTTCCTATT ACCGGCTGCC GCCCGACCAG AAGCGGCATT ACGTCAATGA CACCGGCACT
GGAAACACGG TCAATCTGTC GCATCCGCGC GTGATTCAAA TGGTGACGGA CAGCCTGCGC
TATTGGGTTA ATGAGACCCA TGTCGACGGC TTCCGCTTCG ATCTCGGCAC CATTCTCGCG
CGCGAGCCGA ACGGATTCGA CAATCAGTCG GGCTTCCTCA AGGCGTGCAG CCAGGATCCC
GTGCTCGGCA CGGTGAAGCT GATCGCCGAG CCGTGGGACT GCGGCCCCGG CGGCTATCAG
GTCGGCGCCT TTCCGCCCGG CTGGTCGGAA TGGAATGACA AATTCCGCGG CGCGGCGCGC
GATTTCTGGA GAGGCGCCTG CCGCGCTGGC GATCTCGCGC CGCGGCTTCT GGCTTCGCCC
GAGGAATTCG ATCATCAGGG CCGCAAGCCC TGGGCGTCGG TCAATTTCAT CACCGCACAT
GACGGCTTCA CGCTGAACGA CGTTGTCTCC TACAACGAGA AGCACAATGA GGCGAATGGC
GAAGACAACA AGGACGGCGC AGACGACAAC CGCTCCTTCA ACCATGGGGC CGAGGGGCCG
ACCGACGATC CGGAAATCAA CAGGCTGCGC GAGCGCCAGA TCTGCAACAT GCTGGCGACG
CTGCTGCTCA GCCAGGGGTG TCCGATGGTG GTCGCCGGCG ACGAGTTCGG CCGCACGCAA
CAGGGCAACA ATAACGCCTA TTGCCAGGAC AATGAAGTGT CCTGGGTCGA CTGGAATTTT
GGCGAGCGCG GCCTCAGGCT GATCCGCTTT TTCACGCGCA TCACGGCGCT GCGGCAGCGT
TTCCCGATCT TGCGCCGGGG CCGCTTTTTG ACCGTCGCCT ACAATGAAGA ACTGGATATC
AAGGAGCTGA CCTGGATCAA CGCCGGCGGC GGCGAGATGG AGCAGGGCGA TTGGGAGCTC
GCGCAATGTT TCGGTCTTAT GCTCGACGGC CGCGCGCAGC CGACCGGCAT CCACAAGCGC
GGCGAAGACG CGACCATTTT GATGATCTTC AACGCCTGGG ACGACGTCGT CGAATTCAGC
TTGCCGAGCC AGAGCGGCGC GGATCAGCAC TGGACCTTGA TGATCGACAC CAACCTTTCC
GTCGAGGAGG ATGAAAAGGA AACCCAGACG TTCCGCTTCG GCCAGAAATA TGCGGTGACC
GCGCGCTCCT TCCTGTTGTT CGCGCTGGTT CCGGACGACG GCGGCGCCGA ATAA
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| Protein sequence | MMAETIKSRI REGLPYPIGA TWDGEGVNFA LFSANATKVE VCLFDSEGKT ELERVALPEY
TDQIYHGWLP DVGPGQVYGY RVHGPYEPNA GHRFNPTKLL LDPYGRAHMG DLKWDPAVFG
YTIGHADGDL SFDERDSAPF MPKSIVVDPN FDWRGQPRRS PVAWDRTIFY EAHVRGYTKL
HPKIPEALRG TYAGLGEKQV IDYIKSIGVT SIELLPIHSF INDDYLLDKN LTNYWGYNTI
GFFSPDPRYA ADRANCLREF KEMVSRFHDA RLEVILDVVY NHTAEGNERG PTLSFKGIDN
ASYYRLPPDQ KRHYVNDTGT GNTVNLSHPR VIQMVTDSLR YWVNETHVDG FRFDLGTILA
REPNGFDNQS GFLKACSQDP VLGTVKLIAE PWDCGPGGYQ VGAFPPGWSE WNDKFRGAAR
DFWRGACRAG DLAPRLLASP EEFDHQGRKP WASVNFITAH DGFTLNDVVS YNEKHNEANG
EDNKDGADDN RSFNHGAEGP TDDPEINRLR ERQICNMLAT LLLSQGCPMV VAGDEFGRTQ
QGNNNAYCQD NEVSWVDWNF GERGLRLIRF FTRITALRQR FPILRRGRFL TVAYNEELDI
KELTWINAGG GEMEQGDWEL AQCFGLMLDG RAQPTGIHKR GEDATILMIF NAWDDVVEFS
LPSQSGADQH WTLMIDTNLS VEEDEKETQT FRFGQKYAVT ARSFLLFALV PDDGGAE
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