| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3791 |
|---|
| Symbol | |
|---|
| ID | 7090719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 4154339 |
|---|
| End bp | 4155385 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643467076 |
|---|
| Product | secretion protein HlyD family protein |
|---|
| Protein accession | YP_002364035 |
|---|
| Protein GI | 217979888 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.884849 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGCTC GCCGCGCCGC CCGATTTTGC CTGATCGCTG CTGTTCTGAC CACCACGGGC
GTTGCAACGG CGCAAGGCCA AAGCGATCTG AAGCAGGCCG CGACGAAAGC GGGCGAGATG
GTGCAAACGC TGATCGCGCG CCTGCGCGGC GGCAAAATGC CCGCCGGCAT CGCCAAATCG
AACGGACGCA TCGAGGCGAC GCAGGTCGAC GTCGCCGCGA AATATGGCGG GCGCCTCGAA
ACGCTCAATT TCGACGAAGG CGACGAGGTG ACGGCCGGAC AGGTCGTCGG CAAAATCGCT
GGCCCCGAAT ATGAGGCGCA GCTGCGCGGC GCGCAGGCGC AGGTGCTGGG GGCGAAGCAG
GCATTGGCCG AAGCGGTGGC GCTGATCGCG CAGCGTCAGA GCGATCTGAC CTTCGCGAGG
ACCGATCTCG AACGCGGCCA GAGCCTGCTC CAGCGCGGCA ACATCACGCA GCAGGTGGTC
GATCAGCGGC GCAACAAATT CGAGGCGGCG GAGGCGGCCC ATCGCGCCGC GACCGCGCAG
CGCGACCAGG CGCAATTTGC GATCCAGACG GCGGAAGCCG ATGTGCAACG GCTGCAATCG
ATCCTGGTCG ATCTCGTGCT GGTGTCGCCG CGCAGCGGCC GCGTGCAATA CAGGCTCGCG
CGCGCAGGCG AGGTGGTGGC GCCCGGCCAG CGCATCCTCA CCATCCTCGA TCTCAACGAT
GTTTATATGA CGATCTATCT GCCAGCGTCA GAGGCCGGCA AGCTCGCGCT CAGCGACGAG
GCGCGCATTA TCGCCGATCC CATTCCGCAA TATGTGATTC CGGCCTCGAT CAGCTTTGTC
GCGACCGACG CGCAGTTCAC GCCGAAAAGC GTCGAAACCG AGGATGAGCG GCAAAAGCTG
ATGTTCCGCG TCAAACTACA GGTCGATCCC AAGGTGCTGG AGAAATACCA CCGGCAGGTC
AAGACCGGCG TGCGCGGCAT CGGCTTCGTG CGCACCGCAT CCGGCGCCGA TTGGCCCGAC
GATCTCAAGG TGAAACTGCC GCAATGA
|
|---|
| Protein sequence | MFARRAARFC LIAAVLTTTG VATAQGQSDL KQAATKAGEM VQTLIARLRG GKMPAGIAKS
NGRIEATQVD VAAKYGGRLE TLNFDEGDEV TAGQVVGKIA GPEYEAQLRG AQAQVLGAKQ
ALAEAVALIA QRQSDLTFAR TDLERGQSLL QRGNITQQVV DQRRNKFEAA EAAHRAATAQ
RDQAQFAIQT AEADVQRLQS ILVDLVLVSP RSGRVQYRLA RAGEVVAPGQ RILTILDLND
VYMTIYLPAS EAGKLALSDE ARIIADPIPQ YVIPASISFV ATDAQFTPKS VETEDERQKL
MFRVKLQVDP KVLEKYHRQV KTGVRGIGFV RTASGADWPD DLKVKLPQ
|
|---|
| |