Gene Msil_3748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_3748 
Symbol 
ID7093102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand- 
Start bp4106010 
End bp4106969 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content61% 
IMG OID643467033 
Producthydrogenase accessory protein HypB 
Protein accessionYP_002363992 
Protein GI217979845 
COG category[K] Transcription
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 
TIGRFAM ID[TIGR00073] hydrogenase accessory protein HypB 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGGAA CCTGCGGCTG CGGCGCGAAG ACGCAAGCGA CGATCCTCAA TCTCGAGACC 
GGGGCGGAAA CGACATTGGA CGGCCATGTC CGTTCGCACA CGCAAGACGA TGGCTCAGCG 
CGCCAGCATG AGCATAGCCG CCCTCATGCG CATCCGCACG ACCATGGCGC CGACCATGTT 
CATGCGCGTC ATCACAATCA CGATCACATG CACGATCACG AGCACCTGCA CGATCATGAG 
CATGGCGACC ACGATCATCA ACATGATCAC CGTCATGACC ATGACGACGG CCATGCCCGC 
TCTTCGGTGA TCGAACTCGA AGCGCAGATC CTCGCCAAGA ACGATGCGCT CGCCGCCAAA 
AATCGGGGCT GGTTTCTGGG CCGCGAAATT CTGGCGCTGA ACCTTGTCTC CTCGCCGGGC 
GCGGGCAAGA CGACGCTCTT GGAGCGCACC ATCCGCGACC TCAAAGACAA GATTCCGATC 
TCGGTCATCG AGGGCGATCA GGCGACCTCG AAAGACGGCG AGCGCATTCG CGCGGCGGGC 
GCCGCCGCCG TTCAGATCAA CACCGGCGCC GGCTGCCACC TCGAAGCGGA TATGGTTGAA 
AAGGGTCTCG CCGAATTGAA GCCGCCCTTC GGCTCGATGG TGATGATCGA GAATGTCGGC 
AATCTTGTCT GCCCGGCGCT GTTCGATCTT GGCGAAAGCG CCAAGGTGGT GATCCTCTCG 
GTCACCGAAG GCGACGACAA GCCGCTGAAA TATCCGCATA TGTTCAAAGC TGCCGAGATC 
ATGATCGTCA ACAAGGTCGA TCTCCTGCCT CATGTCGATT TCGACGTCGG CGCGGCGATC 
GACAATGCGA TGAAGGTCAA TCCGGCCATT CTGGCGCTGC GCGTTTCGGC AAGAACCGGC 
GAAGGGTTGG ACGATTGGTA CGCGTGGCTC GATCGCCGCG CGCGGGCCTG CCGGCTTTGA
 
Protein sequence
MCGTCGCGAK TQATILNLET GAETTLDGHV RSHTQDDGSA RQHEHSRPHA HPHDHGADHV 
HARHHNHDHM HDHEHLHDHE HGDHDHQHDH RHDHDDGHAR SSVIELEAQI LAKNDALAAK 
NRGWFLGREI LALNLVSSPG AGKTTLLERT IRDLKDKIPI SVIEGDQATS KDGERIRAAG 
AAAVQINTGA GCHLEADMVE KGLAELKPPF GSMVMIENVG NLVCPALFDL GESAKVVILS 
VTEGDDKPLK YPHMFKAAEI MIVNKVDLLP HVDFDVGAAI DNAMKVNPAI LALRVSARTG 
EGLDDWYAWL DRRARACRL