| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3715 |
|---|
| Symbol | |
|---|
| ID | 7093069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 4075190 |
|---|
| End bp | 4076056 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643467001 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002363960 |
|---|
| Protein GI | 217979813 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.0587379 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATC CGATCGATCC CATCCTCCTG CGCAGCCTGG TCGCGGTCGC CGAGGCAAAA
AGCTTCACCC TCGCCGCCCG GCAACTCGGC CTCAGCCAGT CAACCGTGAG CCAGCATATC
AACAGGCTCG AATTGAAAAC GGCGCGGCGT CTGCTGGCGC GCGACACCCA TTCCGTGAGC
CTGACCCCGG ATGGGGACGC CGTGCTGCCT TTCGCGCGGC AGGCGCTCGA AGCCAACGCG
CGCATCGCCA GCCTGCTCGC GGGCTCGGAT CTGCGCGGAC ATGTCAGGTT TGGCACGTCG
GAGGATTTCG TCGCCACCGC TTTGCCAAAG GTGCTCGCGG AATTTACCGA ACAGCATAGC
GCCGTCGATC TCGAATTGAC GGTCGGCCTC AGCGGCAATC TCTATGAGCG CTATGACGCC
GGCGAACTCG ACCTCATTTT CGTGAAGCGG CGGCGCGGCG ACGAGCGCGG CCGCTTCGGC
TGGAAGGAAG AACTGGTCTG GATCGGCCGC CCGGGTTTCG AGATGAATAT GGATGCGCCG
CTGCCGCTGA TCGCACTGCG TCCGCCGAGC ATAACCCGCG CCCATGCGCT CGCGGCGCTG
GAAAAGGCCA AGCGGAGCTG GCGCATCGTC TGCACCGCCG ACAGTCTGAG CGGGATCAGG
GCGGCGGCTC TCGCGGGGCT CGGCGTCGCC GCCCATTCGG AGCGGCTGAT TCCGGAAGGC
CTGACGCCGC TGCCGGCTTC CCGCGCCTTG CCCGCCTTGG GACATATCGA ATTCGTGGTC
GTCGGCGGCG GGCGCGGCAA TGCGGCGGCC GAAGCGCTCG GCCGCGCGAT CCTCGACAAT
GCGAGCCGCA TCCGCACGGC CGCCTGA
|
|---|
| Protein sequence | MADPIDPILL RSLVAVAEAK SFTLAARQLG LSQSTVSQHI NRLELKTARR LLARDTHSVS
LTPDGDAVLP FARQALEANA RIASLLAGSD LRGHVRFGTS EDFVATALPK VLAEFTEQHS
AVDLELTVGL SGNLYERYDA GELDLIFVKR RRGDERGRFG WKEELVWIGR PGFEMNMDAP
LPLIALRPPS ITRAHALAAL EKAKRSWRIV CTADSLSGIR AAALAGLGVA AHSERLIPEG
LTPLPASRAL PALGHIEFVV VGGGRGNAAA EALGRAILDN ASRIRTAA
|
|---|
| |