| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3659 |
|---|
| Symbol | |
|---|
| ID | 7092932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 4018919 |
|---|
| End bp | 4020592 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643466947 |
|---|
| Product | cytochrome c oxidase, cbb3-type, subunit I |
|---|
| Protein accession | YP_002363906 |
|---|
| Protein GI | 217979759 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
|---|
| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.323256 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACAAA CGCTTTCTCC CGCCGTCGCC AAAACCCCAA GGTTCGGCGA AATTGGCCTC
GCGGGCGTGC TTGCTGTTCT CGCTCTGCTG ACGGCCTTTA TCGCGGTCAA GGCGTGGACG
CCGGGCTATG CCTTCCACAT GGTGGTGATC TGTCTCGCCA GCGTCGCCGG CATTTATGCG
ATCTATCAGC GCTATCAGAC CCGCGACGCC GCTTGGCCGC CGCAGGAGTT GGATGGCGTT
CCCAACTATA ATTTTGGCGC GATCAAATTC TGCACCCTCG CCTCGGTTTT CTGGGGCATC
GCAGGCTTCA CGGTCGGCCT CTACATTGCG CTCGAACTGG CTTTTCCCGA CCTTAATTTC
GCGCGCTGGG TCAACTTCGG ACGGTTGCGG CCGCTGCACA CCTCGGCGGT CATCTTCGCG
TTCGGCGGCA ACATCCTGCT CGCAACCTCG CTCTATATCG TCCAGCGCAC CTCGCGCGCC
CGGCTTCCCG GCGATCTGAC GCCCTGGTTC GTCGCGCTCG GCTACAATCT CTTCATCGTC
ATCGCCGGCA CGGGCTATCT GCTCGGCATC ACCCATTCAA AGGAATACGC CGAGCCGGAA
TGGTACGCCG ACCTTCTCCT CGTCGCCGTC TGGCTATCCT ATTTCGGCAT CTTCCTCGGC
ACGATCATGA AGCGGTCCGA GCCGCATATT TATGTCGCGA ACTGGTTCTT CCTCGCTTTC
ATCGTCACCA TTGCGGTCCT CGTTCTCGGC AATAATGCGG CCATTCCCGT TTCGCTGTTC
TCGTCGAAAT CCTACGTGGT GTGGTCGGGC GTCCAGGACG CGATGATCCA ATGGTGGTAC
GGGCATAATG CGGTCGGCTT CTATCTGACC GCCTCCTTCC TCGGCATGAT GTATTATTTC
GTGCCCAAGC GGGCAGGGCG GCCGGTCTAT TCCTATCGCC TGTCGATCAT CCATTTCTGG
GCGCTGATCT TCATCTATAT CTGGGCGGGC CCGCACCATC TCCACTTCAC GGCGCTTCCC
GATTGGGCGC AGACGCTCGG CATGACCATG TCGATCATTC TGTGGATGCC CTCCTGGGGC
GGCATGATCA ACGGCATGCT GACGCTGTCC GGAGCGTGGG ACAAGCTGCG CACCGATCCC
GTGCTGCGTC TGCTCGTCGT CTCGATCGCC TTTTACGGAA TGTCGACGTT CGAAGGTCCG
TTGATGTCGA TCAAGACGGT CAATTCTCTG AGCCATTACA CCGACTGGAC CATCGGCCAC
GTCCATTCCG GCGCGCTCGG ATGGGTCGGC TACATCTCCT TCGGCGCGCT CTACTGCATC
GTGCCCTGGC TGTGGAACCG TCGCGGCCTC TATTCGCTCA AGCTCGTCAA TTGGCACTTC
TGGATTTCGA CGATCGGCAT CGTCTTCTAC ATCAGCTCGA TGTGGGTCGC CGGCATCATG
CAGGGTCTGA TGTGGCGCGC TTATACTTCG CTCGGCTTTC TCGAATATTC CTTCATCGAG
ACGGTCGAGG CGATGCATCC GATGTATGTG ATCCGCGCGC TCGGCGGCTT CCTGTTCCTC
GTCGGCGCGC TGATCATGGC CTACAATCTT TATATGACCA TCGTCTCGCC GGACGCCGCA
GAGGTGCCGG AATCGCGGCC CTCGCCGCAA CCGCGTCTCG CCCCTGCCGA GTAG
|
|---|
| Protein sequence | MSQTLSPAVA KTPRFGEIGL AGVLAVLALL TAFIAVKAWT PGYAFHMVVI CLASVAGIYA
IYQRYQTRDA AWPPQELDGV PNYNFGAIKF CTLASVFWGI AGFTVGLYIA LELAFPDLNF
ARWVNFGRLR PLHTSAVIFA FGGNILLATS LYIVQRTSRA RLPGDLTPWF VALGYNLFIV
IAGTGYLLGI THSKEYAEPE WYADLLLVAV WLSYFGIFLG TIMKRSEPHI YVANWFFLAF
IVTIAVLVLG NNAAIPVSLF SSKSYVVWSG VQDAMIQWWY GHNAVGFYLT ASFLGMMYYF
VPKRAGRPVY SYRLSIIHFW ALIFIYIWAG PHHLHFTALP DWAQTLGMTM SIILWMPSWG
GMINGMLTLS GAWDKLRTDP VLRLLVVSIA FYGMSTFEGP LMSIKTVNSL SHYTDWTIGH
VHSGALGWVG YISFGALYCI VPWLWNRRGL YSLKLVNWHF WISTIGIVFY ISSMWVAGIM
QGLMWRAYTS LGFLEYSFIE TVEAMHPMYV IRALGGFLFL VGALIMAYNL YMTIVSPDAA
EVPESRPSPQ PRLAPAE
|
|---|
| |