| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3656 |
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| Symbol | |
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| ID | 7092929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 4014674 |
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| End bp | 4017520 |
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| Gene Length | 2847 bp |
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| Protein Length | 948 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643466944 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_002363903 |
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| Protein GI | 217979756 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.480327 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTGA TCACCGAGAT CGATTTCGGC ACTCCCGCCC CAAAATCCGA GAAAATGGTC
ACGCTGACGA TCGACGGGGT CGAAGTCAGC GCGCCCGAGG GGACCTCCAT CATGCGCGCG
GCGATGGAGA TGGGCACGGA AATCCCAAAA CTTTGCGCGA CCGATTCGAT TGAGGCGTTC
GGCTCGTGCC GGCTCTGCCT TGTCGAAATT GAGGGGCGCA ACGGCACGCC GGCCTCCTGC
ACGACGCCGG TCGCGCCCGG CATGTCGGTC AAGACGCAGA CGCCGCGGCT GAAGGCCCTG
CGCAAGGGCG TGATGGAGCT TTATATCTCC GACCATCCGC TCGACTGCCT AACCTGCTCG
GCCAATGGCG ACTGCGAATT GCAGACGCAG GCTGGCGCGG TCGGTCTGCG CGACGTCCGC
TACGGCTATG AGGGCGCCAA TCATTTCGAC AGCGTCAAGG ATCTGTCCAA TCCCTATTTC
GCCTATGACC CGGCCAAATG CATTGTCTGC AACCGCTGCG TGCGCGCCTG CGAGGAAGTG
CAGGGCACCT TCGCGCTGAC CATTGACGGG CGCGGCTTCG GCAGCCGCGT CGCCGCCGGC
CAGGACGAGC CTTTCCTTGA GTCGGAATGC GTCTCCTGCG GCGCCTGCGT TCAAGCTTGC
CCCACCGCGA CGCTGATGGA AAAATCGGTG ATCGAGATCG GCCTGCCGGA GCATTCGGCG
GTGACGACCT GCGCCTATTG CGGCGTCGGC TGCACCTTCA AGGCGGAAAT GCGCGGCGAG
GAGCTCGTCC GCATGGTCCC GTATAAGGAC GGCAAGGCCA ATCACGGCCA TTCCTGCGTC
AAGGGACGGT TCGCCTATGG CTATGCGACG CATCGCGATC GCATCCTGAA GCCGATGATC
CGCGCGTCGA TCGAGGATCC GTGGCGGGAG GTGTCCTGGG ACGAGGCGAT CGGCTACGCC
GCGTCACAGT TCAGGCGCAT CCAGGCGGAA CACGGCAAGC AGGCGATCGG CGGCATCACC
TCCTCGCGCT GCACCAATGA AGAGACCTAT CTCGTCCAGA AGCTGATCCG CGCCGGCTTC
GGCAACAACA ATGTCGACAC CTGCGCGCGC GTCTGTCATT CGCCGACAGG CTATGGCCTC
AAGACCGCCT TCGGCACCTC GGCGGGCACG CAGGATTTCG ATTCGATCGA AGAGACGGAC
GTGATGCTGG TGATCGGCGC CAATCCGACC GACGGGCATC CGGTGTTCGG TTCGCGCATG
AAGAAGCGTC TGCGCGCCGG CGCGAAGCTG ATCGTCATCG ATCCGCGCCG CATCGATCTG
GTTGAAACGC CGCATGTCAA GGCGGATTTC CATTTGCCGC TGCAGCCGGG CTGCAATGTT
TCAGTCGTGA CCTCGCTCGC CCATGTCATT GTGACCGAAG GCCTCGTCAA CGAAGCCTTC
GTGCGCGAGC GCTGCGACTG GTCGGAATTT CAGGATTGGG CGGCTTTCGT CTCCGAGCCG
CGCCATAGCC CCGAAGAGGT CGAGAAGATT TCAGGCGTGC CCGCCGGTCT CATCCGCGGC
GCCGCCAGGC TTTACGCGAC CGGCGGCAAC GCCGCGATCT TCTATGGCCT CGGCGTCACG
GAGCACAGCC AGGGATCGAC GACCGTGCTG GCGATCGCAA ACCTCGCCAT GGCGACCGGA
AATCTCGGCC GGCCGGGCGT CGGCGTCAAT CCGCTGCGCG GCCAGAACAA TGTTCAGGGC
GCATGCGACA TGGGCTCGTT CCCGCATGAA TTCGCGGGCT ATCGCCATGT GTCGGACACG
GCCGCGCGCG ACGTTTATGA AAGCCTCTGG GGCGTCGAAC TCGAGCACGA GCCGGGCCTG
CGCATCCCCA ATATGCTCGA CGCCGCCGTC GAGGGGACGT TCCGCGGCAT CTACATCCAG
GGCGAGGACA TTCTGCAGTC GGACCCCGAC ACGCATCACG TCGCCTCGGG CCTCAAGGCG
ATGGACTGCG TCATCGTCCA GGATCTTTTC CTGAACGAGA CGGCGAATTA CGCCCATGTC
TTCCTGCCGG GCTCGACCTT CCTCGAAAAG GACGGCACCT TCACCAACGC CGAGCGCCGC
ATCCAGCGCG TGCGCAAGGT GATGAGCCCG AAGAACGGCT ATGGCGATTG GGAGATCACC
ATGCTGCTCT CGAACGCCAT GGGCTTCAAG ATGTCCTACA AGCATCCAAG CGAGATCATG
GACGAGATTG CGCTGTCGAC GCCGAGCTTT GCTGGCGTCT CCTACGCCAA GCTCGACGAG
ATGGGCTCGG TGCAATGGCC CTGCAATGCG GCGGCGCCCG AAGGTACGCC AGTCATGCAT
ATCGGCGGCT TCGCCGGCGG CAAGGGCAAA TTCGTCATCA CCGAATATGT CGCCACCGAC
GAGCGGACGG GGCCGCGCTT CCCGCTGCTG CTGACCACCG GACGCATCCT CAGCCATTAT
AATGTCGGGG CGCAGACGCG GCGGACCGCC AATGTCGCCT GGCATCCGGA GGATCTTCTT
GAGATCCATC CCCATGACGC GGAGCTGAGG GGCGTCAAGG ACGGCGACTG GGTGAGGCTG
CATAGCCGCG CCGGCGAAAC GACGTTGCGC GCGCTGGTTA CCGATCGCGT TGCGCCCGGC
GTCGTCTATA CGACTTTCCA TCACCCGATG ACGCAGGCCA ATGTCGTGAC GACGGATTTT
TCCGACTGGG CGACCAATTG TCCGGAATTC AAGGTGACGG CGGTTCAGAT TTCGCCCTCG
AACGGCCCGT CCGAATGGCA GGAAAGCTAT CGCCAGCAGG CCGAGCAGAG CCGCCGCATC
CTGCAGGAGG CGGACGCGGC GGAATGA
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| Protein sequence | MALITEIDFG TPAPKSEKMV TLTIDGVEVS APEGTSIMRA AMEMGTEIPK LCATDSIEAF
GSCRLCLVEI EGRNGTPASC TTPVAPGMSV KTQTPRLKAL RKGVMELYIS DHPLDCLTCS
ANGDCELQTQ AGAVGLRDVR YGYEGANHFD SVKDLSNPYF AYDPAKCIVC NRCVRACEEV
QGTFALTIDG RGFGSRVAAG QDEPFLESEC VSCGACVQAC PTATLMEKSV IEIGLPEHSA
VTTCAYCGVG CTFKAEMRGE ELVRMVPYKD GKANHGHSCV KGRFAYGYAT HRDRILKPMI
RASIEDPWRE VSWDEAIGYA ASQFRRIQAE HGKQAIGGIT SSRCTNEETY LVQKLIRAGF
GNNNVDTCAR VCHSPTGYGL KTAFGTSAGT QDFDSIEETD VMLVIGANPT DGHPVFGSRM
KKRLRAGAKL IVIDPRRIDL VETPHVKADF HLPLQPGCNV SVVTSLAHVI VTEGLVNEAF
VRERCDWSEF QDWAAFVSEP RHSPEEVEKI SGVPAGLIRG AARLYATGGN AAIFYGLGVT
EHSQGSTTVL AIANLAMATG NLGRPGVGVN PLRGQNNVQG ACDMGSFPHE FAGYRHVSDT
AARDVYESLW GVELEHEPGL RIPNMLDAAV EGTFRGIYIQ GEDILQSDPD THHVASGLKA
MDCVIVQDLF LNETANYAHV FLPGSTFLEK DGTFTNAERR IQRVRKVMSP KNGYGDWEIT
MLLSNAMGFK MSYKHPSEIM DEIALSTPSF AGVSYAKLDE MGSVQWPCNA AAPEGTPVMH
IGGFAGGKGK FVITEYVATD ERTGPRFPLL LTTGRILSHY NVGAQTRRTA NVAWHPEDLL
EIHPHDAELR GVKDGDWVRL HSRAGETTLR ALVTDRVAPG VVYTTFHHPM TQANVVTTDF
SDWATNCPEF KVTAVQISPS NGPSEWQESY RQQAEQSRRI LQEADAAE
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