| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3646 |
|---|
| Symbol | |
|---|
| ID | 7092919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 4004474 |
|---|
| End bp | 4006033 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643466934 |
|---|
| Product | nitrogenase cofactor biosynthesis protein NifB |
|---|
| Protein accession | YP_002363893 |
|---|
| Protein GI | 217979746 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01290] nitrogenase cofactor biosynthesis protein NifB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.304877 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAAG CCTATCAAAA CATTGAACAT GACGCCGGCG ACCCCGAGGC GCTCGACGAT
CTGATGCAGA AGATCGCCGA CCACAAGGGA TGTGGAACGT CCGGCGGCAG CGGCAAATCG
AGCTGCGGCA CAGGAGCCGG GGCCAATGAC CTCGCCCCCG AAATCTGGGA AAAAGTCAAA
AACCATCCCT GCTACAGCGA AGAAGCCCAC CATCACTACG CGCGCATGCA TGTCGCCGTC
GCGCCGGCCT GTAATATTCA ATGCAACTAT TGCAACCGCA AATATGATTG CGCCAATGAA
TCGCGCCCCG GCGTCGTCAG CGAGAAGCTG ACGCCGGAAC AGGCGGCCAA GAAAGTGCTG
GCCGTCGCCT CGACGATCCC GCAGATGACG GTGCTCGGCA TCGCCGGCCC CGGCGATCCG
CTCGCCAATC CGGAAAAGAC GTTCAAGACC TTCGAACTGA TTTCCCGGAC CGCGCCCGAC
ATCAAGCTCT GCCTGTCGAC CAACGGCCTC GCCCTGCCCG ATCACGTCGA CACCATCGCC
AAATTCAACG TCGATCATGT GACCATCACG ATCAACATGA CCGACCCGGA AATCGGCGCC
AAGATCTACC CGTGGATCTT CTGGAAACAC AAGCGCATCA CCGGCTATGA GGCGGCCAAG
ATCCTGACCG ATCGCCAGCT GCAGGGCCTC GAAATGCTGA CGGAGCGGGG CATCCTCTGC
AAGATCAACT CGGTGATGAT CCCCGGCGTG AACGACAAGC ATCTCGTCGA AGTCAACCGG
GCGGTCAAAT CCCGCGGCGC ATTCCTGCAC AACATCATGC CGCTGATCTC CGCCCCGGAG
CACGGCACGG TATTCGGCCT CACCGGCCAG CGCGGCCCCT CGGCGCAGGA GCTGAAGGCG
CTGCAGGACA GCTGCGAAGG CGAAATGAAC ATGATGCGGC ATTGCCGCCA GTGCCGCGCC
GACGCCGTCG GACTGCTTGG CGAAGATCGC AGCGCCGAGT TCACCACCGA CAAGATCATG
GAGATGGAGG TCAACTACGA CCTTGAATCG CGCAAGGCCT ATCAGAGCAA GGTCGAGGAA
GAGCGCATCG CCAAGGTCGA AGCCAAGAAC GCCGAGCTCG AAACTCTGGC TGGCGCTTCC
AGCGACATCC AGATCCTGAT CGCCGTCGCG ACCAAGGGCA GCGGCCGCGT CAACGAGCAC
TTTGGCCACG CCAAAGAGTT CCAGGTCTAC GAACTCAGCA CCAAGGGCGC GAAATTCGTC
GGCCACCGCC GCGTCGATCT CTATTGCCAG GGCGGTTACG GCGAGGAAGA CGCGCTCGAG
ACGGTCATTC GCGCCATCAA TGATTGCGCG GCTGTCTTCG TCGCCAAGAT CGGCGGCTGC
CCGAAAGATT CGCTGCGTGC GGCCGGCATC GATCCGGTCG ATCAATACGC CTTCGAATTC
ATCGAGCAAT CGGCGATCGC CTACTTCAAG GATTACCTCG CCAAGGTGAA CAGCGGCGAG
ATCGCGCATG TCATCCGCGG CGACGCCGAC ATCCGCCAAG GCGCTTACGT GCCGGTCTGA
|
|---|
| Protein sequence | MEEAYQNIEH DAGDPEALDD LMQKIADHKG CGTSGGSGKS SCGTGAGAND LAPEIWEKVK
NHPCYSEEAH HHYARMHVAV APACNIQCNY CNRKYDCANE SRPGVVSEKL TPEQAAKKVL
AVASTIPQMT VLGIAGPGDP LANPEKTFKT FELISRTAPD IKLCLSTNGL ALPDHVDTIA
KFNVDHVTIT INMTDPEIGA KIYPWIFWKH KRITGYEAAK ILTDRQLQGL EMLTERGILC
KINSVMIPGV NDKHLVEVNR AVKSRGAFLH NIMPLISAPE HGTVFGLTGQ RGPSAQELKA
LQDSCEGEMN MMRHCRQCRA DAVGLLGEDR SAEFTTDKIM EMEVNYDLES RKAYQSKVEE
ERIAKVEAKN AELETLAGAS SDIQILIAVA TKGSGRVNEH FGHAKEFQVY ELSTKGAKFV
GHRRVDLYCQ GGYGEEDALE TVIRAINDCA AVFVAKIGGC PKDSLRAAGI DPVDQYAFEF
IEQSAIAYFK DYLAKVNSGE IAHVIRGDAD IRQGAYVPV
|
|---|
| |