| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3629 |
|---|
| Symbol | |
|---|
| ID | 7092902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 3991820 |
|---|
| End bp | 3993268 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643466917 |
|---|
| Product | nitrogenase MoFe cofactor biosynthesis protein NifE |
|---|
| Protein accession | YP_002363876 |
|---|
| Protein GI | 217979729 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
|---|
| TIGRFAM ID | [TIGR01283] nitrogenase molybdenum-iron cofactor biosynthesis protein NifE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.205847 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGTT TAGCGAACAA GATCCAGGAC GTTTTCAACG AGCCAGGCTG CGACAAGAAT
CAGGGCAAAT CCGACAAGGA ACGCAAGAAG GGCTGCACCA AGCAATTGCA GCCGGGGGCC
GCTGCCGGCG GCTGCGCCTT CGACGGCGCC AAAATCGCGC TGCAGCCGAT CACCGACGTC
GCCCACCTCG TTCACGGCCC GATCGCCTGC GAGGGCAATT CATGGGACAA CCGAGGCGCC
AAATCCTCTG GATCTCAGCT TTACCGAACC GGCTTTACGA CCGACATCAA CGAGACGGAC
GTCATCTTCG GCGGCGAGAA GCGGCTGTTC AAAGCGATCA AGGAAATTAT CGACAAATAT
GATCCGCCGG CCGTGTTCGT CTATCAGACC TGCGTGCCCG CGATGATCGG CGATGATATC
GGCGCCGTTT GCAAGGCCGC CGCCGCCAAA TTCAACAAGC CCGTCATCCC CGTCATTTCG
CCAGGTTTCG TCGGCCCGAA AAATCTCGGC AACAAGCTCG CCGGCGAGGC CATCCTCGAT
CATGTGATCG GCACGATGGA GCCCGAGTAC ACGACGCCCT ACGACATCAA CATCATTGGC
GAATATAATC TCTCCGGCGA ATTGTGGCAG GTGAAGCCGC TGTTCGACGA ACTCGGCATT
CGCATTTTGT CCTGCATCTC GGGCGACGCC AAATATAAGG AAGTCGCCTG GTCGCATCGC
GCCAAAGCCT CGATGATGGT CTGCTCCAAG GCGATGATCA ACGTCGCCCG CAAGATGGAG
GAGCGCTACG ACATTCCCTT CTTCGAGGGC TCTTTCTACG GCATCGAGGA CACCAGCGAC
TCGCTGCGCG AGATCGCCCG TCTGCTGATC GAAAAAGGCG CCCCGGCCGA GCTGATGGAG
CGCACCGAGG CGGTGATCGC CCGCGAGGAA GCGCTCGCCT GGAAGAGCAT CGAGCCCTAT
CGGGCGCGGC TCGCCGGCAA GCGCGTGCTG CTCATCACGG GCGGCGTCAA ATCCTGGTCG
GTCGTCGCCG CGCTGCAGGA AGCCGGATGT GAAATCGTCG GCACCAGCGT CAAGAAGTCG
ACCAAAGAGG ACAAGGAAAA GATCAAGGAG TTGATGGGCC AGGACGCCCA TATGATCGAC
GATATGACGC CGCGCGAAAT GTACAAGATG CTGAAGGACG CGAAAGCCGA CATCATGCTT
TCCGGCGGCC GTTCGCAGTT CATCTCGCTG AAGGCGAAAA TGCCCTGGCT CGACATCAAC
CAGGAGCGCC ACCACGCCTA TATGGGCTAT GTCGGCATGG CCGAGCTCGT CAAGGAGATC
GACAAGGCGC TCTACAATCC CGTGTGGGAA CAGGCGCGCC GCGCCGCCCC CTGGGAGACG
AAGCCTTCGG AAATGTTTTC GGAGCCCGAG CCGGAACTTG CGGCGCCAAC AGCGCTCGCG
GCGGAATAG
|
|---|
| Protein sequence | MTSLANKIQD VFNEPGCDKN QGKSDKERKK GCTKQLQPGA AAGGCAFDGA KIALQPITDV
AHLVHGPIAC EGNSWDNRGA KSSGSQLYRT GFTTDINETD VIFGGEKRLF KAIKEIIDKY
DPPAVFVYQT CVPAMIGDDI GAVCKAAAAK FNKPVIPVIS PGFVGPKNLG NKLAGEAILD
HVIGTMEPEY TTPYDINIIG EYNLSGELWQ VKPLFDELGI RILSCISGDA KYKEVAWSHR
AKASMMVCSK AMINVARKME ERYDIPFFEG SFYGIEDTSD SLREIARLLI EKGAPAELME
RTEAVIAREE ALAWKSIEPY RARLAGKRVL LITGGVKSWS VVAALQEAGC EIVGTSVKKS
TKEDKEKIKE LMGQDAHMID DMTPREMYKM LKDAKADIML SGGRSQFISL KAKMPWLDIN
QERHHAYMGY VGMAELVKEI DKALYNPVWE QARRAAPWET KPSEMFSEPE PELAAPTALA
AE
|
|---|
| |