Gene Msil_3621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_3621 
Symbol 
ID7092894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand- 
Start bp3986708 
End bp3987742 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content64% 
IMG OID643466909 
ProductFe-S cluster assembly protein NifU 
Protein accessionYP_002363868 
Protein GI217979721 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0694] Thioredoxin-like proteins and domains
[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR02000] Fe-S cluster assembly protein NifU 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.237955 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAA GCGCCGGGAC CCCCGCCATG TTGGACTACA GCGACAAAAT CAAGGATCAT 
TTCTTCAATC CGAAGAATGC CGGTCCCCTC GCCGACGCCA ATGCGGTCGG AGAAGCTGGG 
GCGCTCTCAT GCGGCGACGC CTTGAAGCTG ATGCTGAAAG TCGACCCGCT GACAGAGGTC 
ATTCTCGACG CCCGCTTTCA GACATTCGGC TGCGGCTCGG CGATCGCTTC CTCTTCGGCG 
CTGACCGAGC TCATCATCGG CAAGACAATC GTGCAAGCCG CCGGACTGAC CAACCAGCAG 
ATCGCAGAGT CCCTTGGCGG CCTGCCGCCG GAAAAAATGC ATTGCGCGGT CCTCGGCCAT 
GACGCGCTGC AGGCGGCGAT CGCGAATTTT CGCGGCGAAG CCTGGACGGC CGGCGACGCG 
CCCGGCGCCC TGATCTGCAA ATGCTCCGGC GTCGGCGAAG GCGCGCTGAA GCGCGCCATC 
CGGATGAACA GGCTGACAAG CGTCGACCAA CTCACCGCCT TTACCAAGGC CGGCGCCGGC 
TGCTTCACCT GCTACGACAA GCTTGAGGCC GTCCTCGCGC AAACCAACGC CGAGTTGGTC 
GCCGAAGGAT TGATCGCCAA GGAGGCCGCC TTTTCTCTGC AAACCCGCGC GCCAAGGCCG 
GCGCCGGCCG CAGTCGCAGC GGCGCCCGAG ACCCCAGCGC AGCCGGTCTC GCGCCCCAGA 
GTGCAGATTT CGCCGCTCGC CCCTTCGGCG CCCGCGGGCG AACCGGCGAT GACGAATTTG 
CGCAAGATCA AGCTGATCGA GGAGACGATC GAGGAGCTGC GCCCGTTCCT GCGCAAGGAT 
GGCGGCGATT GCGAATTGAT CGACGTCGAC GGCTCGAATG TCCTCGTCAA AATGTCGGGC 
GCCTGCGTGC TCTGCAAACT CGCCAGCGCG ACGATCTCCG GCATTCAGGA AAAACTGGTC 
GAAAAGCTAG GCGTCCCGCT ACGCGTCATC CCGGTCGGCA AGACCCCTTT CGGCAAAGTC 
GCCGGCGGAC ATTGA
 
Protein sequence
MTESAGTPAM LDYSDKIKDH FFNPKNAGPL ADANAVGEAG ALSCGDALKL MLKVDPLTEV 
ILDARFQTFG CGSAIASSSA LTELIIGKTI VQAAGLTNQQ IAESLGGLPP EKMHCAVLGH 
DALQAAIANF RGEAWTAGDA PGALICKCSG VGEGALKRAI RMNRLTSVDQ LTAFTKAGAG 
CFTCYDKLEA VLAQTNAELV AEGLIAKEAA FSLQTRAPRP APAAVAAAPE TPAQPVSRPR 
VQISPLAPSA PAGEPAMTNL RKIKLIEETI EELRPFLRKD GGDCELIDVD GSNVLVKMSG 
ACVLCKLASA TISGIQEKLV EKLGVPLRVI PVGKTPFGKV AGGH