| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3611 |
|---|
| Symbol | |
|---|
| ID | 7092884 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 3977746 |
|---|
| End bp | 3978534 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643466899 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002363858 |
|---|
| Protein GI | 217979711 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.280477 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATCTGC AATTGCACGG AAAAACAGCT CTCGTCACCG GCTCGACGGC CGGCATCGGG
CTCGAAATCG CGCGAAAACT GGCGGCCGAG GGGGCGGACA CGATCATCTG CGGCCGGACG
CAGGCCAAGC TTGATTCAGC GCTTGCCGAT CTCGCCGCAT CTGGCGGCAA AATCCGCGCG
ATCCTGGCGG ATCCCGCAAC GGCCAAGGGC GCGGCGACGC TGACGGCGGT CGTCCCCGCC
GTGGATATTC TGGTCAACAA CCTTGGGATC TATGAATCGA AGCCATTCGC CGATATTTCC
GACGAAGACT GGCTCAGATT GTTCGAAGTG AATGTGCTCA GCGGCGTCAG GCTGGCGCGG
CAGTATTTTC CGGCCATGCT GCGGCAAAAT TTCGGGCGCA TCATCTTCAT CTCCAGCGAG
TCCGCTCTGA TGACCCCCGC CGAGATGATC CATTACGGCA TGACGAAGAC GGCGCAGCTC
GCCGTCTCGC GCGGTCTTGC GCAACTCACA AAAGGCACGC GGGTGACGGT CAATTCCGTC
CTGCCCGGCC CGACCCGCTC CGAGGGCATT GTCGATTTCC TGAAAAGCGT CGCCGCCGAC
CCGAGCGCCC CGCCGGCGGA GCTCGAAGCG CAGTTTTTCC GCGACCATCG CGCGACCTCG
CTGATCCAGC GCATGATCGA GCCGGACGAG ATCGCGAGCC TTGTCGCCTT TGTGGCGAGC
CCGCTTTCGG CCGCAACGAA TGGCGCTGTC CTGCGCGCCG ACGGCGGCAT TACGCCGACC
GCCGTTTAG
|
|---|
| Protein sequence | MDLQLHGKTA LVTGSTAGIG LEIARKLAAE GADTIICGRT QAKLDSALAD LAASGGKIRA
ILADPATAKG AATLTAVVPA VDILVNNLGI YESKPFADIS DEDWLRLFEV NVLSGVRLAR
QYFPAMLRQN FGRIIFISSE SALMTPAEMI HYGMTKTAQL AVSRGLAQLT KGTRVTVNSV
LPGPTRSEGI VDFLKSVAAD PSAPPAELEA QFFRDHRATS LIQRMIEPDE IASLVAFVAS
PLSAATNGAV LRADGGITPT AV
|
|---|
| |