| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3560 |
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| Symbol | |
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| ID | 7092418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 3919308 |
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| End bp | 3920489 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643466851 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002363811 |
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| Protein GI | 217979664 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCAGC GCAACGCCGG CAGCCTTGCG GCAGGCGGGA TCGCGGCATG TCTCGTCGCG
ATTTTTTCGG TCGCCGCGCA GGCGCAGGCG CCGGGCGGCG CTCCGCCGAG CGTCGGCGTC
GTACGGGCCG AACTGAAGCC GATCACCCAG ACAAGCCAAT TCATCGGCCG CGTGCAGGCT
GTCGACCGGG TCGACATCGT CGCCCGCGTC ACGGCGTTCC TCGACAAAGT GGAATTCCGC
GACGGCGCCG AGGTCAAGAA AGGCGACGTG CTTTACCGGC TGGAGCGCGG TCCGTTCGAA
GCGGACCTTG CGGCCAAGAC GGCCGTCGCC CAGCAATTCC AGGCGCAGCT CGAAAACGCC
AATATTCAGC TCCAACGCGC GCAAACCCTG CTGCAGACGC AATCGGGCGC GCAGGCCACC
GTCGACACGG CGCTGGCGAC GCAGCGCAGC ATCACAGCGC AGCTTCTTGG CGCGCAGGCC
AACGTCAAGC AATCGCAGAT CAATCTCGAC TACACGACCA TCGCGTCGCC GATCGACGGC
AAAAGCGGCC GCACTGCGAT GACGCCAGGC AATGTCGTGA CGCCGACCAG CGGCGTCCTC
GTTACCGTCG TCAGCCAGGA TCCGATGTAT GTGCTGTTTC CGGTTTCGGT GCGCACGCTG
CTGTCGCTGC GCGAGCGTTA CGCTCCGCTC GGTGGCTTCA GCGCGGTCTT GATCAGGCTC
GGTCTGCCGG ATGGACGCAT CTATGATCAG CCCGGAAAAA TTGATTTCGT CGACAATACG
GTGCAGACCT CGACCGACAC CATCATGGTG CGCGCGGTCA TTCCAAACCC GCCCTTGCCG
GTCAAATTAT CGTCAAGAGC CACGCTGCGC GAATTGACGG ATACGGAATT CGTGAGCGTC
TTCTTTGAAG GCGTAAAGCC CGTCGAGTTT CTTGCCGTTC CCCGCGCCGC GCTCCTGTCG
GATCAGCAAA GCGATTATGT CTATATCGTC GATGCCGACG GCAAGGCGCA ACGGCAGAAT
GTGAAGCTGG GCCAATCGAC GCCGACGACG GCGGCGATCG AATCGGGCCT CAAAGCCGGG
GATCTCGTCA TCGTCGAAGG ATTGCAGCGC GTGCGGCCGG GCATCGCGGT TCAGGCCTCG
CCGGCGACGC CCGGACCGCC GGCTCCCGAG CCGCCAAGAT AG
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| Protein sequence | MRQRNAGSLA AGGIAACLVA IFSVAAQAQA PGGAPPSVGV VRAELKPITQ TSQFIGRVQA
VDRVDIVARV TAFLDKVEFR DGAEVKKGDV LYRLERGPFE ADLAAKTAVA QQFQAQLENA
NIQLQRAQTL LQTQSGAQAT VDTALATQRS ITAQLLGAQA NVKQSQINLD YTTIASPIDG
KSGRTAMTPG NVVTPTSGVL VTVVSQDPMY VLFPVSVRTL LSLRERYAPL GGFSAVLIRL
GLPDGRIYDQ PGKIDFVDNT VQTSTDTIMV RAVIPNPPLP VKLSSRATLR ELTDTEFVSV
FFEGVKPVEF LAVPRAALLS DQQSDYVYIV DADGKAQRQN VKLGQSTPTT AAIESGLKAG
DLVIVEGLQR VRPGIAVQAS PATPGPPAPE PPR
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