Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_3558 |
Symbol | |
ID | 7092416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 3914939 |
End bp | 3916141 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643466849 |
Product | lytic murein transglycosylase |
Protein accession | YP_002363809 |
Protein GI | 217979662 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCAGC TTCTTACGCG GCGCCGGTTT GCCGGCTCAG CCCTGGCGGC CGCATTGCTC ATCGACGTCG CCGGCGCCCT GGCGCAGGGC GATCCGGCGT TCCAGCAATT CCTGCTGGCG CTCTGGCCGC GCGCCGAGGC CGCCGGCGTC AGCCGGGCGA CGTTTGACGC GGCGATTTCG GGGCTGACGC CAGACCCATC CGCGCCCTCC GCCGCGGCGA AACAGGCGGA GTTCGACAAG CCGCTCAAAG ACTATCTCGC CTCCGCTGTC TCCAAGGCGC GGATCGCCCG CGGCCGCGCG GCGCTGCAGA AATGGGGCGG CGAACTGACG CGCATTTCCC AGCGCAGCGG GGTCCCGCCT GAAATCATCC TCGCCGCATG GGGCATGGAG ACGGATTTCG GCGCGGCGCG GGGCGGCAAA GACATCATCC GCACGCTGGC GACGCTCGCC TATCAGCGTC AGGACCGCGA GCTGTTCCGC GACGAATGGA TTGCGGCGCT GCTCATCCTG CAAAAGGATT CCGTGCCGCG CGAAAAACTC AAAGGCTCTT GGGCCGGGGC GATGGGCGAC CCGCAATTCA TTCCCTCCGC CTATCTCAAA TATGCGGTGA GCTATGACGG CGCCTCCTTC GCCGATATCT GGGACAGGCC GCAGGACAGC CTTGCCTCGA TCGCCAATTT TCTGCGCCAG TCCGGATGGA AGCCGGCTCT GCCATGGGGC ATGGAAGTCA GGCTGCCGCA AAGCTTTGCC TTTTCCTCGC TGCATGGCGG CTTTGGCGCC TTCGCGGCGC AGGGCGTCGT CAACGCCGAC GGCAGCCCGC TGCGGGCGCA GGGCGACGCC ACCCTATTCC TGCCCTCCGG CGCGGCGGGT CCCGCTTTTC TGCTATCCGA CAATTATTGG GTGTTGAAGG CCTATAATAA TTCAGATTCC TATGCGCTGT CCTTGAGTCT GCTCGCCGAC CGGATTGGCG GCGCCGATGG TCTGCGCGGG CGCTGGCCAA TGGGCGAGGT GTTTCTCAGC CGCGCCGAGA AATCGACGAT CCAGCGTGAA TTGCAAAAGC GGGGGTTCTA CAAGGGAACG ATCGACGGAC GCTTCGGGCA GGCCTCACGC GACGCCATCC ACGCGTTCCA GCTCGCCGAA AAGATCGCTC CGGCAGATGG TTTTGGAACG CCGGATGTGT TGCGGCGACT GGCGCAGCAA TAG
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Protein sequence | MMQLLTRRRF AGSALAAALL IDVAGALAQG DPAFQQFLLA LWPRAEAAGV SRATFDAAIS GLTPDPSAPS AAAKQAEFDK PLKDYLASAV SKARIARGRA ALQKWGGELT RISQRSGVPP EIILAAWGME TDFGAARGGK DIIRTLATLA YQRQDRELFR DEWIAALLIL QKDSVPREKL KGSWAGAMGD PQFIPSAYLK YAVSYDGASF ADIWDRPQDS LASIANFLRQ SGWKPALPWG MEVRLPQSFA FSSLHGGFGA FAAQGVVNAD GSPLRAQGDA TLFLPSGAAG PAFLLSDNYW VLKAYNNSDS YALSLSLLAD RIGGADGLRG RWPMGEVFLS RAEKSTIQRE LQKRGFYKGT IDGRFGQASR DAIHAFQLAE KIAPADGFGT PDVLRRLAQQ
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