Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_3546 |
Symbol | |
ID | 7092403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 3898320 |
End bp | 3899087 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643466837 |
Product | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD |
Protein accession | YP_002363797 |
Protein GI | 217979650 |
COG category | [V] Defense mechanisms |
COG ID | [COG3023] Negative regulator of beta-lactamase expression |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.457198 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGTTA CTAAGACTCA TTCCGCTCTG CCGATGACGC TTCGCGCTTC GCCCAACCAC GGCGAGCGCA AAGGCGGCAA GACGCCGAAC TCGCTCATCC TGCATTACAC CGGCGTGCCG ACGGGCGAGG CCGCGGTCGC GCTGTTGTGC GACCCGGCGA GCGAAGTCTC AGCCCATTAC GTCGTCATGC CGGACGGCGA GATCATGCTG CTGGTGCCGG AGGCGCGGCG CGCCTGGCAC GCCGGCCGCG GCATCTGGGC CGGCGAGACC GATATGAACG ATGTCTCGAT CGGCATCGAA ATCGCCCATC CGGGCCACAA GAACGGCCGC GCCGCGCATC CCTATCCTGA GGCGCAGATC GCCTCGGTGA CAGCGCTTTG CGGCGATATC GTCGAACGCT GGCGAATCGC GCCCGACCGC GTGCTCGCCC ATTCAGACAT CGCGCCCGAC CGCAAAATCG ACCCCGGCGA GTTTTTCCCC TGGGATTGGC TCGCCCACGC GGGGATCGGC CATTATGTCG CCCCCTGCCC AATCTCCGCC GGACCTCGCC TCGACCATAA TTCACGCGGG GCCGAGGTCG AGGAATTGCA GGCGATGCTC GGCGCCTATG GTTATGGCGC GCCGGTCAGC GGCGCCTATG ACGCGCGGAC GCAATGTGTC ATTCGCGCCT TCCAGCGCCA TTTCAGGCCG GCGCTGGTCG ATGGGATCGC CGATTTTTCG ACGGTCGCAA CTTTGCGAAA ATTGCTGGCG ATGCGGCCGG GCGTCTAA
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Protein sequence | MLVTKTHSAL PMTLRASPNH GERKGGKTPN SLILHYTGVP TGEAAVALLC DPASEVSAHY VVMPDGEIML LVPEARRAWH AGRGIWAGET DMNDVSIGIE IAHPGHKNGR AAHPYPEAQI ASVTALCGDI VERWRIAPDR VLAHSDIAPD RKIDPGEFFP WDWLAHAGIG HYVAPCPISA GPRLDHNSRG AEVEELQAML GAYGYGAPVS GAYDARTQCV IRAFQRHFRP ALVDGIADFS TVATLRKLLA MRPGV
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