| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3545 |
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| Symbol | metH |
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| ID | 7092402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 3894550 |
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| End bp | 3898287 |
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| Gene Length | 3738 bp |
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| Protein Length | 1245 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643466836 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_002363796 |
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| Protein GI | 217979649 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.229259 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCATC GCTTTGACGG AGCAGAAACC CGAGCCGCCT TCCTTGACGC TGCGCGGAAA
AGAATCCTGG TGCTCGACGG CGCCATGGGG ACGATGATCC AGCAGCATAA ATTCACCGAG
GAGCAGTTTC GCGGCGAGCG CTTTGCCGAT TGGCCGAGCG ATCTGCGCGG CAACAATGAT
CTCTTGAGCC TGACCCAGCC GAAGGCGATC GAACAGATCC ATCGCGCCTA TATCGACGCT
GGCGCCGACA TCATCGCGAC CAACACTTTC AATTCGACAA GCATCTCGCA GGCCGACTAT
GGCATGCAGG AGCTTGTCTT CGAGCTTAAT CGGGAATCGG CGCGGCTGTG CCGGGTGGCC
GCCGACGCCG CGGAGAAACA CGACGGCAAG CGCCGCTTTG TCGCCGGCGC GCTTGGTCCG
ACGAGCCGCA CGGCCTCGAT TTCGCCGGAC GTCAACAATC CGGGCTTTCG CGCCGTCAGC
TTCGATGAAT TGCGCGACGC CTATGACGAG GCCGCGCGGG CGCTGATCGA GGGCGGCGCC
GACCTTCTGA TCATCGAGAC AATCTTCGAC ACGCTGAACG CCAAGGCTGC GCTCGCCGGC
GTGCGCGATG CTTTCGCCAA GCTTGGCGTC GAAGCGCCGG TCATGATTTC CGGCACGATC
ACCGATCTCT CCGGCCGCAC CCTGTCCGGC CAGACGCCGA CAGCCTTCTG GCATTCCCTG
CGCCACGCCG ATCCTTTGAC GATCGGGCTC AACTGCGCTC TCGGCGCGCG GGAAATGCGC
GCCCATCTCG CCGAACTCTC GCGCATCGCC GATACGCTCG TCTGCGCCTA TCCAAACGCC
GGTCTTCCGA ACGAATTCGG CCTTTACGAC GAGAGCCCCG AATATATGGC GAGCCTTGTC
GGCGAATTCG CCGACTCGGG GCTAGTCAAT GTCGTCGGCG GCTGCTGCGG CACGACGCCC
GCCCATATCC ATGCGATCGC CAAACGCATC GAGGGGGTCG CGCCGCGCGA GATCCCGGAG
ATCGCGCCCT TGCTGCGCCT GTCCGGCCTC GAGCCTTTCG TGCTCGCGCC TGAAATTCCC
TTCGTCAATG TCGGCGAGCG CACCAATGTC ACCGGCTCGG CCAAATTCCG GAAGCTGATC
AAACAGGGCG ATTTTGCCGC GGCGCTCGAC GTTGCGCGCG ATCAGGTCGC GGCCGGCGCG
CAGATCATCG ACGTCAATAT GGACGAGGGC TTGCTCGACT CCGAAAAGGC GATGGTCGAA
TTCCTAAATC TCATCGCCGC CGAGCCGGAC ATCGCGCGCG TGCCGGTGAT GATCGATTCC
TCGAAATTCT CGGTGATCGA GGCCGGGCTG AAATGCGTGC AGGGCAAGTC GGTCGTCAAT
TCGATCTCGA TGAAAGAGGG GGTCGAAAAA TTCATCGCCG ACGCCCGCAC GGTGCGCGCC
TATGGCGCCG CCGTCGTCGT CATGGCTTTC GACGAGAAGG GCCAGGCCGA CACCTTTGAA
CGCAAGGTCG AGATCTGCGC CAAGGCCTAT CAGATCCTGA CGCAGGAGGC TGGCTTTCCG
CCCGAAGACA TCATCTTCGA TCCGAATATC TTCGCCATCG CGACGGGCAT CGAGGAACAC
AATAATTACG GCGTCGACTT CATCGAGGCG ACGCGGGAGA TTCGCAAGCG CTTCCCGCTC
GTGCACATTT CCGGCGGCGT CTCCAATCTA TCGTTCTCGT TTCGCGGCAA TGAGCCGGTG
CGCGAGGCCA TGCACGCCGT GTTTCTCTAC CACGCCATCC AGGCCGGCAT GGATATGGGC
ATCGTCAATG CGGGGCAGCT CGCGGTCTAC GCCGAGATCG AGCCGGGGCT GCGCGAGGCC
TGTGAGGACG TCGTGCTCAA CCGGCGTCCC GACGCCACCG AGCGCCTGCT TGCGATCGCC
GAAGGGTTTC GCGGCCATGG AGTCGAAAAA GCCGAAAGAG ACCTTGTCTG GCGCGAGCAG
CCGGTCATCA AGCGGCTTGA ACATGCGTTG GTCAATGGCA TCACCGAATT TGTCGAGCTC
GACGTCGAAG AGGCGCGCGC CGCATCCAAG CGCCCGCTCG ACGTGATCGA AGGCCCGCTG
ATGGCCGGAA TGAATGTCGT CGGCGATCTC TTCGGCGCCG GCAAGATGTT CCTGCCGCAG
GTCGTCAAAT CGGCTCGCGT GATGAAGCAG GCGGTCGCCT ATCTTCTTCC CTATATGGAC
GAGGAGAAGC GCAAGAATGG CGGCTCGGAG CGCTCCACCG CCGGCAAGAT CTTGATGGCG
ACGGTCAAGG GCGACGTGCA CGATATCGGC AAGAATATCG TCGGCGTCGT GCTTGCCTGC
AACAATTACG AGATCATCGA TCTTGGCGTC ATGGTTCCCG CCGCGAAGAT TCTCAGCGTT
GCGCGGGCGG AAAAAGTCGA CGCCATCGGC CTGTCCGGCC TTATCACGCC TTCGCTCGAC
GAGATGTGCT ATGTCGCCGC CGAAATGGAG CGCGAGGGTT TCGATCTGCC CTTGTTGATT
GGCGGCGCCA CAACAAGCCG CGTGCATACG GCGGTCAAGA TCCACCCCAA CTACACGCGC
GGACAAACCG TCTATGTCAA TGACGCCAGC CGCGCAGTTG GCGTCGTGCA GTCGCTGCTT
GGCGAGAGCG CGCGCGATGC GGCCGAGACC TTCCGCGCCG AATATGAAAA GGTGGCGGCG
GCGCATCGCC GCGGCGAAGC GGAAAAGCTG CGCCTGCCGA TCGGCAAGGC GCGCGCCAAT
GCGCTCAAGA TCGATTGGGA CGACTATGCG CCGCCGCGTC CGACCTTTAC CGGCTCGCGC
GTGTTTCGCA GCTATGACGT CGCCGAGCTC ATCCCTTACA TCGACTGGAC GCCCTTCTTT
CAGACCTGGG AGCTGCGCGG CCGCTATCCG GCCATCCTCG ACGATCCCAA ACAGGGCGAG
GCGGCGCGCA GCCTCTTTGA CGACGCGCAG GCGATGCTGA AGCGCATGGT CGAGGAGCAT
TGGCTCGATC CGAAGGCGGT GATCGGCTTC TGGCCGGCCA ATTCCGTGGG CGATGACATC
GCGCTCTACA CAGGTGAATC GCGTTCGGAA AAACTTGCGG CCTTCCATAC TCTGCGGCAA
CAGCTGACGC GCCGCGACGG AAAACCCAAC ATCGCCCTGT CGGATTTTAT CGCGCCCGCG
GGCGGCAAAC CCGACTACAT CGGCGCTTTC GTCGTCACGG CGGGCGCGCA GGAAGGCAAG
ATCGCCGACC GCTTCGCCAA AGCCAACGAC GACTACGGCT CGATCCTCGT CAAGGCGCTT
GCCGACCGCA TCGCCGAAGC CTTGGCCGAG CGCATGCACG AGCGCGTGCG GCGCGAATTC
TGGGCCTATG CGCCGGACGA GGCGATCTCC GAGGATGACC GCTTGCGCGA AGAATATCGC
GGCATTCGTC CCGCGCCCGG CTATCCGGCT CAGCCCGACC ACACGGAAAA GGCGACGCTG
TTCGAACTGC TGGCGGCAGA AAAACGGATT GGCGTTTCGC TGACGGAAAG CTTTGCGATG
TGGCCGGGCG CCTCTGTGTC GGGGCTCTAT TTCGCGCATC CGCAGGCGCA TTATTTCGGC
GTCGCCAAGA TCGAGCGCGA TCAGGTCGAG GATTACGCGC TGCGCAAGGG GATGAGCGTC
GCCGAGATGG AGCGCTGGCT GGCGCCGATC CTCAACTATG ATCCGGCGAG CGTCGCGGAG
GCGGCCGCGG CGGAATAG
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| Protein sequence | MTHRFDGAET RAAFLDAARK RILVLDGAMG TMIQQHKFTE EQFRGERFAD WPSDLRGNND
LLSLTQPKAI EQIHRAYIDA GADIIATNTF NSTSISQADY GMQELVFELN RESARLCRVA
ADAAEKHDGK RRFVAGALGP TSRTASISPD VNNPGFRAVS FDELRDAYDE AARALIEGGA
DLLIIETIFD TLNAKAALAG VRDAFAKLGV EAPVMISGTI TDLSGRTLSG QTPTAFWHSL
RHADPLTIGL NCALGAREMR AHLAELSRIA DTLVCAYPNA GLPNEFGLYD ESPEYMASLV
GEFADSGLVN VVGGCCGTTP AHIHAIAKRI EGVAPREIPE IAPLLRLSGL EPFVLAPEIP
FVNVGERTNV TGSAKFRKLI KQGDFAAALD VARDQVAAGA QIIDVNMDEG LLDSEKAMVE
FLNLIAAEPD IARVPVMIDS SKFSVIEAGL KCVQGKSVVN SISMKEGVEK FIADARTVRA
YGAAVVVMAF DEKGQADTFE RKVEICAKAY QILTQEAGFP PEDIIFDPNI FAIATGIEEH
NNYGVDFIEA TREIRKRFPL VHISGGVSNL SFSFRGNEPV REAMHAVFLY HAIQAGMDMG
IVNAGQLAVY AEIEPGLREA CEDVVLNRRP DATERLLAIA EGFRGHGVEK AERDLVWREQ
PVIKRLEHAL VNGITEFVEL DVEEARAASK RPLDVIEGPL MAGMNVVGDL FGAGKMFLPQ
VVKSARVMKQ AVAYLLPYMD EEKRKNGGSE RSTAGKILMA TVKGDVHDIG KNIVGVVLAC
NNYEIIDLGV MVPAAKILSV ARAEKVDAIG LSGLITPSLD EMCYVAAEME REGFDLPLLI
GGATTSRVHT AVKIHPNYTR GQTVYVNDAS RAVGVVQSLL GESARDAAET FRAEYEKVAA
AHRRGEAEKL RLPIGKARAN ALKIDWDDYA PPRPTFTGSR VFRSYDVAEL IPYIDWTPFF
QTWELRGRYP AILDDPKQGE AARSLFDDAQ AMLKRMVEEH WLDPKAVIGF WPANSVGDDI
ALYTGESRSE KLAAFHTLRQ QLTRRDGKPN IALSDFIAPA GGKPDYIGAF VVTAGAQEGK
IADRFAKAND DYGSILVKAL ADRIAEALAE RMHERVRREF WAYAPDEAIS EDDRLREEYR
GIRPAPGYPA QPDHTEKATL FELLAAEKRI GVSLTESFAM WPGASVSGLY FAHPQAHYFG
VAKIERDQVE DYALRKGMSV AEMERWLAPI LNYDPASVAE AAAAE
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