Gene Msil_3539 details

Gene Information

• Locus tag: Msil_3539
• ID: 7092396
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylocella silvestris BL2
• Kingdom: Bacteria
• Replicon accession: NC_011666
• Strand: +
• Start bp: 3889845
• End bp: 3890534
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 643466830
• Product: transcriptional regulator, LuxR family
• Protein accession: YP_002363790
• Protein GI: 217979643
• COG category: [K] Transcription
• COG ID: [COG2771] DNA-binding HTH domain-containing proteins

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 36
• Fosmid unclonability p-value: 0.184303
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACTCCCT TCGCGATGTA TTTGGACGAA ATCAACCTGG AATGCGAGGA AAAGCGCGCG 
CACGCCGGCT TGACGCGGCG CGTCGCCGAG ATTGGGCTCC TCTCGCGTTC GCCGGTCGGC 
GATCTAAACA CAACCGATCC GCTGAATATT CTGTCGCTGC CGGCGCTTCT GCTCGACCTT 
GACGGCTGCG TCGTCGAGAG CAACACCGCG GCGGGAGCCC TGTTCGACAA TGACATCAGG 
GTGCGCCAGC GCCGGCTTTT TATCCGCGAT CTGGAAGCGC GCAACAAGCT GCGCATCTAT 
GTCGATCAAT TCGAATATGC GACGCCGCGC TTTGCCCCGT CGATCGAGCC GATCATTGTG 
CCGCGGCAGG ACAAGCTGCC GGTCTTGGTG CGGATCTGGC CGATCGACAG CGGCGCGCGC 
TGGCCGTCTT CGGACGTTCG GGCGCTTTTG ACCTTGAGTT CCCTCGGGCC CCGTCCGGGG 
CCGCCCGCCG CTCTGCTCGC CAAGATCTTC TCGCTGACGC CGTCCGAAGC CAAGCTCGCG 
GCGATCATCG CGCGAGGCGT CGGCCCGGAC ACGGCCGCGA TCGAACTCAA CATTTCGCGC 
GAGACGGCCC GCAACCAGTT GAAGTCGATC TTCGCCAAGA CGGGAACCCA CCGGCAAGGC 
GAACTGGTCG CGCTTCTGCT GCAAGTCTGA 

 

Protein sequence

MTPFAMYLDE INLECEEKRA HAGLTRRVAE IGLLSRSPVG DLNTTDPLNI LSLPALLLDL 
DGCVVESNTA AGALFDNDIR VRQRRLFIRD LEARNKLRIY VDQFEYATPR FAPSIEPIIV 
PRQDKLPVLV RIWPIDSGAR WPSSDVRALL TLSSLGPRPG PPAALLAKIF SLTPSEAKLA 
AIIARGVGPD TAAIELNISR ETARNQLKSI FAKTGTHRQG ELVALLLQV