Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_3538 |
Symbol | thrS |
ID | 7092395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 3887215 |
End bp | 3889161 |
Gene Length | 1947 bp |
Protein Length | 648 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643466829 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_002363789 |
Protein GI | 217979642 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.211804 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGATG TTACCTTTCC CGATGGCGCC ACGCGTCAGT TTCCCGCCGG CGCAAGCGGG TTCGACATCG CCAAAGCCAT TTCCCCCTCG CTCGCCAAAC GCACGGTCGC CATGATCGTC GACGGCTCCC TAAGCGATCT CGCCGATCCC GTCCGCCACG GGGCGCGCGT GGAGTTCATC GGCCGCGAGG ATAAGCGCGC CCTTGAGCTC ATCCGCCACG ACGCCGCGCA TGTCCTCGCC GAAGCGGTGC AGACGCTCTA TCCGGGCACG CAAGTGACGA TCGGTCCCGT CATCGAGAAC GGGTTCTATT ACGATTTTTT CCGCAACGAG CCGTTCACGC CGGACGATTT TGCCGCCGTC GAAAAAAAAA TGGCCGAAAT CATCGCGCGC GACAGGCCCT TCACGAAGGA GGTCTGGAGC CGCGATCAGG CGCGCTCCTT CTTCGAGACA AGGGGCGAGG CGTTCAAGGT TGAACTCGTC GACTCTATTC CGGGCGACGA GGATCTGAAG ATCTACCGGC AGGGCGACTG GCTCGACCTC TGCCGCGGCC CGCATATGAC CTCAACCGGC AAGATCGGCG ACGCATTCAA GCTGATGAAG GTCGCCGGCG CCTATTGGCG CGGCGATTCG AACCGCCCCA TGCTGCAACG CATCTATGCG ACGGCCTTCG CCACGCGCGA GGAGCTCGCG GCCTATCTGA GGCAGATCGA GGAGGCCGAG AAGCGCGACC ATCGGCGGCT CGGGCGGGAA ATGGACCTGT TCCATTTTCA GGAGGAAGGC CCCGGCGCGA TCTTCTGGCA CCCCAAGGGC TGGACCCTGT TCCAGACCCT CATCGCCTAT ATGCGGCGAC GCATGGAGGC TGACGGCTAT CTCGAAGTGA ATACGCCGCA GGTGCTCGAC CGCGCCCTCT GGGAAACCTC CGGCCACTGG CAGACTTTTC GCGAACACAT GTTCCTTACC AAGACCGAGG ACGAGCGGAT CTTCGCGCTG AAGCCGATGA ACTGTCCCGG CCATGTGCAG ATCTTCAAGA ACGGCCTCAA ATCCTATCGC GACCTGCCGC TGAAGATCGG CGAGTTCGGC GTCGTGCATC GCTATGAGCC GTCCGGCGCG CTGCATGGGG TCATGCGGGT GCGCGCCTTC ACGCAGGATG ACGCGCATAT CTTCTGCACG GAAGATCAGA TCATGGCTGA GAGCCTCAAG GTCAATGATC TGATTCTCTC GATCTATCAA GACTTTGGCT TTGACGACGT CATTATCAAG CTCTCGACGC GCCCCGAAAA ACGCGTCGGC TCGGAAGAGG CCTGGGACAA GGCGGAGGCG GCCCTCGGCC GGGTCGTCGA CATGCTGGCG GCTGGAGGCG CGAAGACCGG CGTCAATCCC GGCGAGGGCG CGTTTTACGG TCCAAAGCTC GAATATACGC TACGCGACGC GATCGGCCGC GAATGGCAAT GCGGGACGAC GCAAGTCGAT TTCAATATGC CCGGCCGCTT CGGGGCCTTC TATATCGACG CCGACAGCGA CAAAAAGACG CCAGTCATGA TCCATCGCGC GATCTTCGGA TCGCTCGAAC GATTCACCGG CATTCTGATC GAGCATTTTT CAGGCAATCT GCCTTTGTGG CTGGCGCCGG TGCAGGTGAT CGTCGCGACG ATCACCCAGG ACGCCGACGA CTATGCGCTC GAAGTGGCGG CGGCGGCCCG CAAATACGGC CTGCGCGTCG AAGCGGATTT GCGCAACGAA AAGATCTCCT ACAAGATTAG GGAGCATTCC CTCGCCAAGA CGCCGGTGCT GATCGTCGTC GGCAAACGGG AGGGGCTGGA GCGCACTGTT TCGATTCGGC GGCTCGGCGC TTCCGATACG ACAAGTCTGA GCCTCGAGAC GGCGCTGGAG CGCCTCGCGG ACGAAGCAAC GCCGCCAGAT CTCAGGCGCC TTCGCAGCGC AGCATGA
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Protein sequence | MIDVTFPDGA TRQFPAGASG FDIAKAISPS LAKRTVAMIV DGSLSDLADP VRHGARVEFI GREDKRALEL IRHDAAHVLA EAVQTLYPGT QVTIGPVIEN GFYYDFFRNE PFTPDDFAAV EKKMAEIIAR DRPFTKEVWS RDQARSFFET RGEAFKVELV DSIPGDEDLK IYRQGDWLDL CRGPHMTSTG KIGDAFKLMK VAGAYWRGDS NRPMLQRIYA TAFATREELA AYLRQIEEAE KRDHRRLGRE MDLFHFQEEG PGAIFWHPKG WTLFQTLIAY MRRRMEADGY LEVNTPQVLD RALWETSGHW QTFREHMFLT KTEDERIFAL KPMNCPGHVQ IFKNGLKSYR DLPLKIGEFG VVHRYEPSGA LHGVMRVRAF TQDDAHIFCT EDQIMAESLK VNDLILSIYQ DFGFDDVIIK LSTRPEKRVG SEEAWDKAEA ALGRVVDMLA AGGAKTGVNP GEGAFYGPKL EYTLRDAIGR EWQCGTTQVD FNMPGRFGAF YIDADSDKKT PVMIHRAIFG SLERFTGILI EHFSGNLPLW LAPVQVIVAT ITQDADDYAL EVAAAARKYG LRVEADLRNE KISYKIREHS LAKTPVLIVV GKREGLERTV SIRRLGASDT TSLSLETALE RLADEATPPD LRRLRSAA
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