| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3530 |
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| Symbol | |
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| ID | 7092387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 3878211 |
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| End bp | 3879434 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643466821 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_002363781 |
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| Protein GI | 217979634 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00127] isocitrate dehydrogenase, NADP-dependent, eukaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.00918215 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAAGA TCAAGGTCGC AAATCCCGTC GTCGAACTTG ATGGCGATGA GATGACCAGG
ATCATCTGGC AATATATTCG CGATAAACTC GTTCTCGCTT ATCTCGACCT CGACCTCGAA
TATTACGATC TTTCTGTCGA AAATCGAGAC GCTACCGCCG ATCGGGTGAC GGTGGACGCG
GCGAACGCCA TCAAGAAGCA CGGCGTCGGC GTCAAATGCG CGACGATCAC GCCCGACGAA
GCGCGCGTGA AGGAATTCAA CCTAAAGCAG ATGTGGAAGT CGCCGAATGG CACGATCCGC
AATATTCTCG GCGGCGTCAT TTTCCGCGCG CCGATCATCT GCAAAAACGT TCCCCGCCTG
GTGCCGGGCT GGACGCAGCC GATCGTGATC GGCCGCCACG CCTTCGGCGA TCAATATGCG
GCGACCGATT TCAGGGTGCC AGGCAAAGGC AAGCTCACTA TCAAATTCGA AGGCGACGAC
GGAACGGTCA TCGAAAAGGA AGTCTATAAA TATCCAGGCG CCGGCGTCTC GCTGTCGATG
TACAATCTCG ACGATTCCAT CCGCGATTTT GCGCGCGCCT CGCTGAATTA TGGCCTCGAC
GCCAAATATC CCGTCTTTCT CTCGACCAAG AACACCATTC TCAAGGCCTA TGACGGGCGC
TTCAAGGATC TGTTCCAGGA GGTGTTCGAG GCCGAATTCA AGGAAAAGTT CGACGCCGCC
GGCATCATCT ACCAGCATCG TCTGATCGAC GACATGGTCG CCTCGGCCCT CAAATGGTCC
GGCGGCTACG TCTGGGCCTG CAAGAACTAC GACGGCGACG TGCAGTCCGA TACGGTGGCG
CAGGGCTTTG GTTCGCTCGG CCTCATGACC TCCGTGCTGC TCAGCCCCGA CGGCCGGACT
GTCGAGGCCG AGGCCGCCCA TGGGACGGTG ACGCGCCACT ATCGCGAACA CCAGAAAGGC
AAGGAGACCT CGACCAATTC GATCGCCTCG ATCTTCGCCT GGACGCGCGG CCTGTCGCAT
CGAGCCAAGC TTGACGACAA TCCGGAACTC GCGGCCTTCG CGCAGACGCT CGAGAAGGTC
TGCGTCAAGA CCGTCGAATC GGGCTTCATG ACGAAGGATC TCGCCCTGCT CGTCGGCGCC
GATCAAAGAT GGCTTTCGAC CACCGGCTTC CTCGACAAGG TTGACGAGAA TTTGCGCAAG
GCGATGTCTG CGCCCAAAGC GTGA
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| Protein sequence | MSKIKVANPV VELDGDEMTR IIWQYIRDKL VLAYLDLDLE YYDLSVENRD ATADRVTVDA
ANAIKKHGVG VKCATITPDE ARVKEFNLKQ MWKSPNGTIR NILGGVIFRA PIICKNVPRL
VPGWTQPIVI GRHAFGDQYA ATDFRVPGKG KLTIKFEGDD GTVIEKEVYK YPGAGVSLSM
YNLDDSIRDF ARASLNYGLD AKYPVFLSTK NTILKAYDGR FKDLFQEVFE AEFKEKFDAA
GIIYQHRLID DMVASALKWS GGYVWACKNY DGDVQSDTVA QGFGSLGLMT SVLLSPDGRT
VEAEAAHGTV TRHYREHQKG KETSTNSIAS IFAWTRGLSH RAKLDDNPEL AAFAQTLEKV
CVKTVESGFM TKDLALLVGA DQRWLSTTGF LDKVDENLRK AMSAPKA
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