| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3523 |
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| Symbol | alaS |
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| ID | 7092380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 3868028 |
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| End bp | 3870715 |
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| Gene Length | 2688 bp |
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| Protein Length | 895 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643466814 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_002363774 |
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| Protein GI | 217979627 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0021732 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACGGCG TTAACGAAAT ACGGGCGGGT TTCCTCGATT ACTTCAAGAA GAACGGCCAT
GAGATCGTGG CGTCTTCGCC GCTCGTGCCG CGCAATGACC CCACCCTAAT GTTCACCAAC
GCCGGGATGG TCCAGTTCAA GAATGTCTTC ACCGGCCTCG AAAAGCGCCC CTATACGCGC
GCCGCGAGCG CGCAGAAATG CGTCCGCGCC GGCGGCAAGC ACAATGATCT CGACAATGTC
GGCTATACTG CAAGGCACCA CACCTTCTTC GAGATGCTCG GCAATTTCTC CTTCGGCGAT
TACTTCAAGC CGCTGGCGAT CGAGCTGGCC TGGAAGCTGA TCACGCAGGA ATTCGGTCTG
CCGAAAGATC GTCTCCTCGT CACCGTCTAT CATACCGACG ACGAAGCCTT TGATTTATGG
AAGAAAATCG CCGGCTTTCC CGATTCGAAG ATCATCCGCA TCGCCTCTTC CGATAATTTC
TGGGCGATGG GCGACACCGG CCCCTGCGGC CCCTGCTCCG AAATTTTTTA TGACCAGGGC
GAAAGGCTGA AGGGCGGCCC GCCCGGCAGC CCCGACGAGG ATGGCGACCG GTTCCTCGAA
TTCTGGAACC TCGTCTTCAT GCAGTTCGAA CAGCTCGGGC CAGGCGAACG GATCGATCTG
CCGCGCCCCT CGATCGATAC CGGCATGGGG CTCGAGCGCA TCGCCGCGCT GCTGCAGGGC
GTCACGTCGA ATTATGACAT CGACCTCATG CGCGCGCTGA TCGTGGCGAT CGCCGCGGCG
ACCGGCGTCG ATCCCGACGG GCCGCAGAAG GCCAGCCATC GCGTCATCGC CGACCATTTG
CGCGCCTGCG CCTTCCTCAT TGCCGATGGA GTGACCCCCT CCAACGAAGG CCGCGGTTAT
GTGCTGCGCC GCATCATGCG CCGCGCCATG CGCCACGCGC AGCTGCTTAG CGCGCGCGAG
CCATTGATGT GGCGGCTCGT CCCCGTGCTC TCGCGCGAGA TGGGGCAGGC CTATCCCGAG
CTGATCCGCG CCGAGTCGCT GATCGTCGAG ACCCTGCGGC TCGAAGAGGC CCGCTTCATC
GACACGCTGG CGCGCGGCCT CTCGATCCTC GACGAAGCCG TGCGCGACTT ACCCGAGGGC
GCCCCCCTGC CGGGGCAGGT GGCGTTCAAG CTCTATGATA CCTATGGTTT TCCGCTCGAC
CTGACGCAGG ACGCGCTGCG GGCGCGTTCG CTCGCCGTAG ACGTGGACGG CTTCAATACC
GCGATGGAGC GTCAGCGCGC CGACGCGCGC AGGGCTTGGG CCGGCTCCGG CGAGGCTGCG
ACCGAAACCC TCTGGTTCGC GATCAAGGAC GAGGCGGGCG CGACAGATTT CCTCGGCTAT
GAAGCCGAAC AAGCGGAAGG CGTCGTCGCC GCGCTCGTCA AGGACGGCAA GCCGGTCGAA
CGCCTCAACA AGGGCGAGAC CGGAGCCATT ATCCTCAACC AAACGCCGTT CTATGCCGAA
TCAGGGGGAC AGGTCGGCGA CACGGGCGTG ATGAGCGCCG CCGGGGTTCG CTTCCGCGTC
ACAGACACCA AGAAGAAGCT TGGCGATCTG TTCGTGCATG AGGGAATCGT CGAGGAAGGC
GAGATCACGC CCGGCCTCGC GCTCGAACTG TCGGTCGATC ACGCGCGCCG CTCGGCGATC
CGGGCCAATC ATTCGGCGAC CCATCTCCTG CATGAATCGC TGCGGCTCGT GCTCGGAGAT
CACGTCGCGC AAAAAGGCTC GCTCGTCGCC GACGACCGTC TGCGGTTTGA CTTCACCCAT
CTGAAGCCGA TCTCGCCGGA AGAGCTCACG CGCGTCGAGG ACATCGCCAA TCGCGCGGTC
ACCGACAATG CGCCCGTCGT CACCCGGCTG ATGGCGGTCG ACGAGGCGAT CGCCTCCGGC
GCGCGCGCTT TGTTCGGCGA GAAATATGGC GACGAGGTCC GCGTCGTAAC GATGGGCTAT
GCGCAGGACC GCGAGGACAG CGGAGACGGC GGCGCCAACA GGGCCTTTTC CGTCGAGCTC
TGCGGCGGCA CCCATGTTGC GCGCACGGGC GACATCGGCC TTATTGCGAT CACGTCGGAA
TCGGCCGTCG CCGCCGGCGT GCGGCGCATC GAGGCGAAGA CGGCGGCCGC GGCGCGGCGC
CATCTCAACG CGCGCTCCGA CAAGCTTGAG CACATCGCCG TCCTGCTCAA ATCCTCCGAG
GACGACGCCG AAAAACGATT GGCCGCTCTC CTGGAGGAGC GGCGCAAGCT CGATCGCGAG
CTGGCCGATG CGCGCAAGAA ACTGGCCATG GGCGGCGGCG AAAAAGCCGC GGCCGAGGCG
CAAGAAATCG GGGGCGTTAA ATTTTTTGGC CGCGCCGTTT CGGGCGTCGA TCTGAAGGAT
CTGAAATCGC TCGCCGACGA GGCCAAACAG ACGGTTGGTT CGGGCGTCGT CGCCATCGCC
GGCGTCGATA GCGACGGCAA GGCGGGTGTC GTCGTCGGCG TGACCGCGGA CCTCGTCGAG
CGGTTCGATT CTGTCGCGCT GGTTCGCCTC GCCGCCACGG AGCTCGGCGG CAAGGGCGGC
GGCGGCCGGC GCGACATGGC GCAGGCGGGC GGCCCGAACG GCGCTGGCGT CGACGCGGCC
CTGGCTGCGA TCGCCAACGG ACTGCGCGGC GCTCAAAACG CCGCCTGA
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| Protein sequence | MNGVNEIRAG FLDYFKKNGH EIVASSPLVP RNDPTLMFTN AGMVQFKNVF TGLEKRPYTR
AASAQKCVRA GGKHNDLDNV GYTARHHTFF EMLGNFSFGD YFKPLAIELA WKLITQEFGL
PKDRLLVTVY HTDDEAFDLW KKIAGFPDSK IIRIASSDNF WAMGDTGPCG PCSEIFYDQG
ERLKGGPPGS PDEDGDRFLE FWNLVFMQFE QLGPGERIDL PRPSIDTGMG LERIAALLQG
VTSNYDIDLM RALIVAIAAA TGVDPDGPQK ASHRVIADHL RACAFLIADG VTPSNEGRGY
VLRRIMRRAM RHAQLLSARE PLMWRLVPVL SREMGQAYPE LIRAESLIVE TLRLEEARFI
DTLARGLSIL DEAVRDLPEG APLPGQVAFK LYDTYGFPLD LTQDALRARS LAVDVDGFNT
AMERQRADAR RAWAGSGEAA TETLWFAIKD EAGATDFLGY EAEQAEGVVA ALVKDGKPVE
RLNKGETGAI ILNQTPFYAE SGGQVGDTGV MSAAGVRFRV TDTKKKLGDL FVHEGIVEEG
EITPGLALEL SVDHARRSAI RANHSATHLL HESLRLVLGD HVAQKGSLVA DDRLRFDFTH
LKPISPEELT RVEDIANRAV TDNAPVVTRL MAVDEAIASG ARALFGEKYG DEVRVVTMGY
AQDREDSGDG GANRAFSVEL CGGTHVARTG DIGLIAITSE SAVAAGVRRI EAKTAAAARR
HLNARSDKLE HIAVLLKSSE DDAEKRLAAL LEERRKLDRE LADARKKLAM GGGEKAAAEA
QEIGGVKFFG RAVSGVDLKD LKSLADEAKQ TVGSGVVAIA GVDSDGKAGV VVGVTADLVE
RFDSVALVRL AATELGGKGG GGRRDMAQAG GPNGAGVDAA LAAIANGLRG AQNAA
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