| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3505 |
|---|
| Symbol | |
|---|
| ID | 7092529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 3849674 |
|---|
| End bp | 3850438 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643466796 |
|---|
| Product | heme exporter protein CcmC |
|---|
| Protein accession | YP_002363756 |
|---|
| Protein GI | 217979609 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
|---|
| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.0026692 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAACT ACGCCAATCC GACGAATTTC CTGGCGGCGG CCCGCGTGGC GACGCCGATC
CTCGCGACGC TGACCGGCGC GCTCTTGGCC GTCGGTCTTT ACCTCGCATG GTTTGTCGCG
CCGCCGGATT ATCAGCAGGG CGAGACCGTC CGCATTATGT ATCTGCACGT GCCCGCCGCG
TGGCTGTCGA TGTTCATCTA TGTGACGATG ACGTCGGCGG CGCTTGGCAG TCTCGTCTGG
CGCCATCCGC TCGCCGACGC CGCGCAAAAG GCCGCCGCGC CGCTCGGCGC GGGCTTCACT
TTTCTCTGCC TCGTCACCGG CTCGCTGTGG GGCAAGCCGA TGTGGGGCGC CTGGTGGGTC
TGGGACGCCC GGCTGACCTC CGTGCTGGTG CTTTTTCTGA TTTATCTGGC TCTTGTCGCG
CTCTGGCGCA CGATCGAGGA CCCCGGCAAG GCGGCGCGGG CGGCGGCGAT TTTCACGCTT
GTCGGCGCTG TCAATATTCC GATCATCAAA TTCTCGGTGG ATTGGTGGAA CACGCTGCAT
CAGCCAGCTT CGGTCTTCCG CATCGGCGGC CCGGCGATCG CGGGCTCGAT GCTCTGGCCG
CTGCTCGTGA TGGCGCTGGC CTTTACCCTG CTGTTCGTGA CCCTGCATGT CATGGCGATC
CGCAATGAAA TCTTGCGCCG GCGCCTGCGG CGGCTGTCCA TCCAGACGGC GGACGCCGAT
CGCGGCGAAT TTTCCGCGCC CGCCTCGCTC GGGACGGCGC AATGA
|
|---|
| Protein sequence | MRNYANPTNF LAAARVATPI LATLTGALLA VGLYLAWFVA PPDYQQGETV RIMYLHVPAA
WLSMFIYVTM TSAALGSLVW RHPLADAAQK AAAPLGAGFT FLCLVTGSLW GKPMWGAWWV
WDARLTSVLV LFLIYLALVA LWRTIEDPGK AARAAAIFTL VGAVNIPIIK FSVDWWNTLH
QPASVFRIGG PAIAGSMLWP LLVMALAFTL LFVTLHVMAI RNEILRRRLR RLSIQTADAD
RGEFSAPASL GTAQ
|
|---|
| |