| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3492 |
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| Symbol | ddl |
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| ID | 7092516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 3833085 |
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| End bp | 3834008 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643466783 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_002363743 |
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| Protein GI | 217979596 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAAAC ATGTCGCCGT TCTGATGGGC GGACTCTCGG CTGAGCGCGA GGTTTCGCTG
CGCTCGGGCG CCGCCTGCGC CAAGGCGCTC GAAGCGGAAG GATTTAGGGT CACGACGCTC
GACGTCGACC GCGACATCGC GCAAAAGCTC GCGGCGCTGC GGCCCGACGC CGCCCTCAAT
GCTTTGCACG GACGCTATGG CGAAGACGGC GTGATCCAGG GCGTGCTTGA AATGCTCGCC
ATTCCTTATA CTCATTCCGG CGTGCTCGCC TCGGCGCTCG CCATGCAGAA GGATCGCGCC
AAAGATGTTC TGCGCGCCGC CGGCGTGCCG GTGGCCGAGG GCGTCACCAT CGGGCGCTTC
GAGGCGGCCA AGGCGCATGT CATGACGCCG CCCTATGTGG TCAAGCCGCT CGGCGAGGGC
TCGTCCTTCG GGGTCATCAT CGTGCGCGCC GATCAGACGC ATCCGCCGCA GGAGCTGACG
CGCGACGACT GGGCCTATGG CGACCTCGTT CTGGTCGAAC GCTTCGTCGC CGGACGCGAA
CTGACCTGCG CCGTCATCGG CGACAAGGCC TATGGCGTCA CCGAAATCCG CGCCGCGGAC
GGCGGATGGT ACGATTATGA CGCAAAATAC AAGGCTGGCG GCTCGATCCA CATCCTTCCG
GCAAATCTTA AAGAATTTGT TTACCAAAAT GTACAAGAGT TAGCTCTTGT GGCGCACAGA
GCGCTCGGCT GTCGCGGGGT AAGCCGGACT GACTTTCGCT ACGACGATAC GCCTCAAGGG
ACAGGCGAGC TCGTCGTGCT CGAAGTCAAC AGCCAACCCG GAATGACCGA GACGTCGCTG
GTGCCAGAGA TCGCGGCATA TGCCGGCATA TCTTTTGGTG AGCTTGTTCG ATGGATGGTC
GAAGACGCTT CCTGCGATCG CTAA
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| Protein sequence | MSKHVAVLMG GLSAEREVSL RSGAACAKAL EAEGFRVTTL DVDRDIAQKL AALRPDAALN
ALHGRYGEDG VIQGVLEMLA IPYTHSGVLA SALAMQKDRA KDVLRAAGVP VAEGVTIGRF
EAAKAHVMTP PYVVKPLGEG SSFGVIIVRA DQTHPPQELT RDDWAYGDLV LVERFVAGRE
LTCAVIGDKA YGVTEIRAAD GGWYDYDAKY KAGGSIHILP ANLKEFVYQN VQELALVAHR
ALGCRGVSRT DFRYDDTPQG TGELVVLEVN SQPGMTETSL VPEIAAYAGI SFGELVRWMV
EDASCDR
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