| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3483 |
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| Symbol | murD |
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| ID | 7092507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 3825564 |
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| End bp | 3826949 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643466774 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_002363734 |
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| Protein GI | 217979587 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCCGG TTGGCGTGTT CCGCGATCAG TCCGTCGCGG TGTTCGGCCT CGGCGGCTCG
GGCTTCATCA CCGCGCAGGC GCTGGTGGCG GGCGGCGCCA GCGTCTACGT CTGGGACGAT
AATGAACATG CGCGCGAAAA GGCGCGCGCC GCCGGCCTCA GGATCGAAAA TCTTGCGAGC
GTCGACTGGC GGGGATTCAG CGCGCTCGTG CTGTCGCCGG GCGTTCCTCT CACCCATCCG
GCGCCGCATT GGACCGTCGT CAAGGCGCGG GAGGCCGGCG TCGAGGTCAT CGGCGATATC
GAGCTGTTCT GCCGCGAGCG GCGGCGCATC GCGCCGGACG CGCCTTTGAT CGCCATTACC
GGCACCAATG GCAAATCGAC CACCACCGCG TTGATCGCGC ATCTCTTTGC GACGCTCGGC
TTTGACGTTC AAATTGGCGG CAATATCGGC ACGCCGATCC TGGCGCTGGA GCCGCCGAGC
TCCGAGCGGG TGCATGTCGT CGAATGCTCG TCCTATCAGA TCGATCTTGC CCCCTCGCTC
GATCCGACCG TCGGCGTTCT TTTGAACGTC ACCCCGGATC ATCTCGATCG CCATGGGACA
ATGGAGAATT ATGCGGCGAT CAAGGCGCGG CTCGTTTCCG CCGCCGACCA TGCCGTCATC
GGCGTCGACG ACGCCTTTTG CGCGGCGATC GCAAAAAAAC TGCGCGCCGA GGGCCATGAC
GTCATCGGCG TTTCGGCCGC CGGAATGCTC GAAGGAGACG GCGTCGTTTT CGAGGGCGGC
GCGCTCTATT GGCGCGGCGG CCGGCGCCTC GACCTCATTG CCGATCTTTC CGGCGTCGGC
TCGCTGCGCG GCGCGCATAA CGGCCAGAAC GCCGCCGCCT CCGTCGCTGT CCTGCATGCG
ATCGGCCTTG ACGGCGCAGG CCTCGCCAAG GGCCTTCGCT CCTTCGCCGG CCTCGCCCAC
CGGATGGAGG AGGTCGGAAA ATATGGCAAG GCGCTGCTCG TCAATGATTC GAAAGCGACC
AACGCCGACG CCGCCGAAAA AGCGCTTCTC TCCTTCGACA ATATCTTCTG GATTCTGGGC
GGCCGCGCCA AGCAGGGCGG CATCGAATCC TTGAAGCCGC TGTTCGGCAA AATCGCCAAG
GGCTATCTCA TCGGCGAGGC GAGCCACGAC TTCGCCAAGA CCATCGGCGA CGCCTTTCCG
GTCGCCTTCT GTCAGACGCT CGAAAACGCC TTGCCGCTCG CCGCGCGCGA TGCGATCGAG
AGCGCAAGGG CCGAGCCCGT CGTGCTGCTC TCCCCCGCCT GCGCCTCCTT CGACCAGTTT
CCCGATTTCG AAAAACGCGG CGACCGTTTT TGCGAAATCG CGCGCGCTCT CATCAAGGCA
TACTGA
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| Protein sequence | MIPVGVFRDQ SVAVFGLGGS GFITAQALVA GGASVYVWDD NEHAREKARA AGLRIENLAS
VDWRGFSALV LSPGVPLTHP APHWTVVKAR EAGVEVIGDI ELFCRERRRI APDAPLIAIT
GTNGKSTTTA LIAHLFATLG FDVQIGGNIG TPILALEPPS SERVHVVECS SYQIDLAPSL
DPTVGVLLNV TPDHLDRHGT MENYAAIKAR LVSAADHAVI GVDDAFCAAI AKKLRAEGHD
VIGVSAAGML EGDGVVFEGG ALYWRGGRRL DLIADLSGVG SLRGAHNGQN AAASVAVLHA
IGLDGAGLAK GLRSFAGLAH RMEEVGKYGK ALLVNDSKAT NADAAEKALL SFDNIFWILG
GRAKQGGIES LKPLFGKIAK GYLIGEASHD FAKTIGDAFP VAFCQTLENA LPLAARDAIE
SARAEPVVLL SPACASFDQF PDFEKRGDRF CEIARALIKA Y
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