| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3465 |
|---|
| Symbol | |
|---|
| ID | 7092488 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 3803386 |
|---|
| End bp | 3804369 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643466756 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_002363717 |
|---|
| Protein GI | 217979570 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGATTG TGATCCTTGC TCCCCAAGGG GTTCAATCGC TTGATGTTGT CGGGCCGGCG
GAAGTGTTCT GGGAGGCCGC GCGGCGGCTT GGTGATCCTT TCGCCTATGA GGTCGTCGTC
ATGGGCGCAA CGGCCGAGCC AATCTCAGGA ACCGGAAGCC TCCGCTTTCT GCCAGATTGC
ACCATCGACG ATCCGGACCA AGAGATCGAT ACGCTGCTGG TAGGAGGCGA CCCTTCCTTC
GACGAAATCG ATCCGAAGGT AACGGCGTGG CTGCGCCGCC GCGCGCCGAC GATACGGCGT
TATGGCTCCG TCTGCACCGG CGTATTTCTG CTTGCCGCCG CCGGCCTGCT CGACGGCCGC
AGGGTCACGA CCCATTGGGA ATGTGCGGCC AAACTGAAAA GCGAATATCC GGATGTCATC
GTCGACGCCG ACCAGATTTT CATTCGCGAG GGCGCGCTAT GCACGACGGC TGGGGTCACC
GCCGGCATGG ACCTCGCCCT GGCTCTGGTC GAAGAAGACT ATGGCCGCAA TCTCGCATTG
ATCGTCGCGC GCTATATGGT GATGTTTCTC AAGCGGCCAG GCGGCCAGTC GCAGTTTAGC
ACCCATCTGG CCGCGCAGAT GTCCGGCAAA AGCGCGATCC AGCAGGCGCA GGAATATGCG
CTGCAAAACC TCGCGACGCC GCTGTCGATC ACAGCCATGG CGCAGCAGGC GGGAATGAGC
GTCCGCAATT TTGCTCGCGT TTTCCGGCGC GAGATCAAGA TGACGCCCGC CGATTTCGTC
GAGGCGGCGC GTCTTGAGGC CGCTCGCCGA AGCCTCGAGG ATTCGCTGAC GCCGCTTCAG
CACATCGCCA CGGCTTGCGG ATTCGGCAAC AGCGACGCGA TGCGCCGAGC TTTCGTTCGC
ACCCTTGGCG TCAGTCCTTA CGACTACCGG CGGCGATTCC GGAGCGCGCT CTATAAGCAG
GGCGTTGAAC GCGGTTGTAG CTGA
|
|---|
| Protein sequence | MRIVILAPQG VQSLDVVGPA EVFWEAARRL GDPFAYEVVV MGATAEPISG TGSLRFLPDC
TIDDPDQEID TLLVGGDPSF DEIDPKVTAW LRRRAPTIRR YGSVCTGVFL LAAAGLLDGR
RVTTHWECAA KLKSEYPDVI VDADQIFIRE GALCTTAGVT AGMDLALALV EEDYGRNLAL
IVARYMVMFL KRPGGQSQFS THLAAQMSGK SAIQQAQEYA LQNLATPLSI TAMAQQAGMS
VRNFARVFRR EIKMTPADFV EAARLEAARR SLEDSLTPLQ HIATACGFGN SDAMRRAFVR
TLGVSPYDYR RRFRSALYKQ GVERGCS
|
|---|
| |