| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3443 |
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| Symbol | |
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| ID | 7092466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 3783782 |
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| End bp | 3786007 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643466739 |
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| Product | transcriptional regulator, CdaR |
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| Protein accession | YP_002363700 |
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| Protein GI | 217979553 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGCAT CCAGGCTGGA TCACGCGCAT GCAATGCCGC CGCCGCAGGA CGCCGGCGCC
GATCCGCTGA TGGCGCTGGA GGCGCTGACG AAGCGCGTCG CGGCGTCGGT CGAAGGCGGC
TCGCATGGGG TGTTCGCAGA AGCCGAGCGA GCTCTCGCGG AGTTTGCCAA GGCTCGCGCC
GTACGTATCC TCGTCAATGC GGCGGGAAGC TGGCGTCCGT GGCGCCAGCT CGACACGCCG
GACACGCCGC GCTCTGATTC GGCGCCCGAA CTTGCCCCGG GCGCTCCGCT TCTCGCCGAC
GACCGCATCG TGGCGACCAT CCGCGCCGGG TGTATCGTTG CATTGATCGA CCACGCCGCG
ATCGGCGAAG CGCGCCGGCA GGCGCTGAAC GTCGCCGCAA ATTGCATCGA TCTTGCGATC
ACGACCGGTG AGCGCCAAGA CAGTTCAAGT CGCAATGCGA CGGAGATGCA GGCGCTTCAG
AACGTCGCCG GTCGCATCCT CCAGAGTTCG GATATCGAGG AGATCCTGCT TCTCGTCAGC
CACGAAACCA AGCGGTTGCT GGCGTCGGAT ATTTGCGGCG TGCTGATGCG CGTCGGCGAC
GAAGTGGTGA TGCGAAATTG TGTCGGACAT TTTTCGGCGG AGCTGGCCAA GCTGCGCATG
AAGCCCGGCA AGGGCGTCGC CGGCCGCGTG CTCGCCACCA GCGAGCCTTT CGCGGTCGCT
AATTATGTCG AAAGCGACGC GATCAGTCCG GATTTCATTC CCCTCGCGCG GATTGAGAAG
GTGCGCTCGG CGGCGGCGGC GCCGATTGTT TCGCGTGACG CGGTGATTGG CGTCCTTGAA
GTATGGCGGC GGCGTCCTTC GACCTATACC GAGCAGGATG CGAACCTGCT TCTCGCGCTG
GCCGGACTTG CTTCGCTTGC GATTGTGAAC GCGGAACTCT TGCAATCGCG CGCTTGCGCC
GCCGCGGAGC TCGCGGTCGT CAACGCCACG CTCGCGCAAC GCTGCGCCAC GATCGAGAAT
TCAGCCAAAT TTCAGGAAAA AATCGTACAG CTGATGTTGA GCGGACGGCC TCTTTCTGTC
CTGGCGGCGA CGACGGCGGA GCATGTCGAG GGAACCGTGC TGGTGCTCGA TCGCGACCTC
GCGATCGAGA CGGCGCAGCC TGACCCGGGA GAAAGCGCGG GCGCGATACT TGATCTGGCG
CGGTCCATCA TCAAGAAAGT CAACCGCATT CCCGATCAGG CGATCGTTAT GGGCGCGGGG
GACGATCATG TGCTGGCGCA GCCTGTTCTC GCCGGCGCCG AATTGCTCGG TTGGATTGTC
TGGCGCGGCG ACGCCGAGCC GTCCGAGACG ACGAGGCTGG CGTTGAGCCA TGTTTCGCTC
GCGGTCGCGA TGCTGCTGCT CGAACGTCGC AGCGCCGCCC GCGCGCGGGC CGAGACCGTC
CAGGCGGTGC TCTGGGATCT GCTTGAGGGC GATGAAGTGG TTAGCGCGGC GGCGCTCGAT
CGCGCAAGGG AAATGAACGT GTCTTTCAAG GGTAAGGTCT GCGTGCTTGT CGCCACGCTG
GAGAGCTTCG GTCCTGGCAA GGACCGCGGC GCCGGCCTGC CCGACGGGAC CACCCATGAT
CGTGTGCTTG ACCGCGCCCG TCTCGCCGAC CTCGGACGCA GCGCCCATAT GGTGGGCTTG
CGCGGCGACC AGCTTCGCAT GATCTGCAAG GCCGCTGACG CGGAGTCGCT TTGCGCCGCG
GCGGCTCGGA TGATCCACGA CATCAGGCTC GAGGCCTCGG GCGTGTCGCT CAAGGCAGGC
ATTAGCGGAC CATGCGGCGA TCTGCGCAAG CTGCCGGCAT GTTTCCGCGA AGCGACCGTC
GCTCTCGAGG TGGCGCAATA TCGTCATGGC CAGCCCGTCG CCTGCTACAG CGACATTGGC
GTACTCGGCC TGTTGATTAA CTTACGCGGC AAAACGGATA TCCGGCGCGT CAGCGAGGAG
ATCCTTGGCG AGCTTACTTC GGAGCCTCAG CCGTCGCGCA AAATTCTGTT GGAGACGATG
CAGACATTCT TCGAATGCGA CTGCTCGCAG ATTGCGACAG CCGCCAAGCT CGGAGTGCAT
CAGAAGACCA TCGCCTATCG CCTTGGCAAA GTGTCCCGCC TTACAGGCCT CGATCTCGCG
CGGCACCAGG ATAGGCTGCT CGCAGATATT GGGATTCGCC TGAGCCTGAC GCTTGAAGCG
AAATAA
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| Protein sequence | MAASRLDHAH AMPPPQDAGA DPLMALEALT KRVAASVEGG SHGVFAEAER ALAEFAKARA
VRILVNAAGS WRPWRQLDTP DTPRSDSAPE LAPGAPLLAD DRIVATIRAG CIVALIDHAA
IGEARRQALN VAANCIDLAI TTGERQDSSS RNATEMQALQ NVAGRILQSS DIEEILLLVS
HETKRLLASD ICGVLMRVGD EVVMRNCVGH FSAELAKLRM KPGKGVAGRV LATSEPFAVA
NYVESDAISP DFIPLARIEK VRSAAAAPIV SRDAVIGVLE VWRRRPSTYT EQDANLLLAL
AGLASLAIVN AELLQSRACA AAELAVVNAT LAQRCATIEN SAKFQEKIVQ LMLSGRPLSV
LAATTAEHVE GTVLVLDRDL AIETAQPDPG ESAGAILDLA RSIIKKVNRI PDQAIVMGAG
DDHVLAQPVL AGAELLGWIV WRGDAEPSET TRLALSHVSL AVAMLLLERR SAARARAETV
QAVLWDLLEG DEVVSAAALD RAREMNVSFK GKVCVLVATL ESFGPGKDRG AGLPDGTTHD
RVLDRARLAD LGRSAHMVGL RGDQLRMICK AADAESLCAA AARMIHDIRL EASGVSLKAG
ISGPCGDLRK LPACFREATV ALEVAQYRHG QPVACYSDIG VLGLLINLRG KTDIRRVSEE
ILGELTSEPQ PSRKILLETM QTFFECDCSQ IATAAKLGVH QKTIAYRLGK VSRLTGLDLA
RHQDRLLADI GIRLSLTLEA K
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