Gene Msil_3416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_3416 
Symbol 
ID7092142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp3753090 
End bp3754460 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content64% 
IMG OID643466715 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_002363676 
Protein GI217979529 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATGC GCATTTCGGA TCTTTTCCGC ACCGCGTCGT TTCGTCTCGC GGTGCTGTTT 
GCCTTCGCGG TGACCGCCGC GACAACGGTC GTCTTTCTCT TCATCTACTG GCATGTCGCG
ACCTTCGACG TCCGCCGAGT CGATGTGCGA CTTTCGGAGG AGGTCGCTCG GGCCGCGGCG
GAGCCGGACG ATCAGCTGCG CCGCCAGCTT AGGCGGCGCC TTACGAGCGA TCTGCGAAAG
CTCGACTACG TCGGGCTGTT CGACGCGCAG GGAAAGCCCG TCTTCGGCAA TGTCGGCGCC
TTGCCGGAGG CGCTTCCGAT CGACGGCGAG CCGCATCCGA TCGAGGTCGC GCCGCTCAGC
GGCCGTTCGG GAACCGAGCC GGCCCTGCTC GCCGCGCGTC GGCGCGCGAA CGGCGGCGTC
GTCCTGATCG GCCGCAGCCT TTATGAGGTC TACGCCCTGC GGCGGCTTGT CGTTCGCGCC
CTTGCGCTCG GCATCGCGCC AACAATCCTT TCGGCGCTGA TCATCGGGCT AATCTTCAGC
CTGCGCACGG TGAGGCGTCT TCGCAGCGTC AACGAGGCGA TTTTCCGCAT CATGCAGGGC
GATCTGCAGG ACAGGTTGCC CGTCGGCCCC TGGAAGGACG ACGTCGACAA TATCGCGAAC
GGCGTCAATC TGATGCTTGA CGAGATCGTC CGTCTCCTCG ATCAGATCAG AAGCGTGAGC
GACAACATCG CGCATGATTT GCGCTCGCCC CTCGCGATCA CGCGGCTCAG CCTTGAACGC
GGTCTCGCGG CGGCCGCCGA GAAGGATCTT CGCCTCGCGA CGGAACGCGC TCTTGCCGAG
CTCGACCGCG CCCTCACGAC CGTGTCTGCA CTGTTGCGGA TTTCGGAAAT CGAGCTCGGA
CGCCGACGGC ATGAATTTGT CCCCATCGAT CTCGCCGAGG TCTGCGCGAC GGCCTTCGAG
CTCTACGAGC CGCTGGCGGA AGCAAGATCA ATCTCCTTCA CGCTCGACGC AGGGCGCCCC
GCGCCGCTGT CCGGCGATCA CGATCTGCTC GTCGAAGCCA TCGCCAATCT CCTCGACAAC
GCGCTGAAAT TCGCGCCGGA GAATGGCATT GTCCGCCTCT CGGCGTCTGT CGTTTCGGGG
TGCGCCGAGG TCGCCGTTTG CGACAATGGA CCGGGCGTCG ATCCGAGCGA GCGCAGCGAA
ATCTTCAAGC GCTTCTATCG TTCGAAATCG GCCCGCGCCA TTCCCGGAAC AGGCCTTGGC
CTCAACCTCG CGGCCACGAT CTTCAGCCTG CATGGGCTTG ATCTCAAAGT GACGGACAAT
CACCCCGGCG CCCGCTTTGT GGCCTCGCAA CGCTTGCCGA CTTCGTCATA A
 
Protein sequence
MPMRISDLFR TASFRLAVLF AFAVTAATTV VFLFIYWHVA TFDVRRVDVR LSEEVARAAA 
EPDDQLRRQL RRRLTSDLRK LDYVGLFDAQ GKPVFGNVGA LPEALPIDGE PHPIEVAPLS
GRSGTEPALL AARRRANGGV VLIGRSLYEV YALRRLVVRA LALGIAPTIL SALIIGLIFS
LRTVRRLRSV NEAIFRIMQG DLQDRLPVGP WKDDVDNIAN GVNLMLDEIV RLLDQIRSVS
DNIAHDLRSP LAITRLSLER GLAAAAEKDL RLATERALAE LDRALTTVSA LLRISEIELG
RRRHEFVPID LAEVCATAFE LYEPLAEARS ISFTLDAGRP APLSGDHDLL VEAIANLLDN
ALKFAPENGI VRLSASVVSG CAEVAVCDNG PGVDPSERSE IFKRFYRSKS ARAIPGTGLG
LNLAATIFSL HGLDLKVTDN HPGARFVASQ RLPTSS