| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3414 |
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| Symbol | |
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| ID | 7092140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 3746510 |
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| End bp | 3750898 |
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| Gene Length | 4389 bp |
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| Protein Length | 1462 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643466713 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002363674 |
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| Protein GI | 217979527 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump
[COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATCG GCATCGTCAG GCTGGCGCTT TCACGTCCTT TGACCTTCGT CGTGATGGCG
ATTTTGATCG CCATTTACGG GGCACTCGCC ATATTGAAGA CCCCGACGGA TATTTTCCCG
AATATCGGCA TCCCGGTCGT CAGCGTCATC TGGACCTATA ACGGCCTGCC GCCCGGCGAC
ATGGCCGGGC GCGTCATCTC GAACTATGAG CGGGCGGTGT CGACGACGGT CAACGACATC
GAGCACATCG AGTCGCAATC CTTCGTCACC TACGGCGTCG TCAAGATCTA TTTCCAGCCG
ACGGTCGACG TCAGCGCGGC GCAGGCGCAG GTCACCGCGA TCTCCCAAAC GATCCTGAAG
CAGCTTCCCG CGGGGATCAA CCCGCCGCAG ATCCTCGTCT ACAACGCCTC GAGCGTGCCA
ATCATTCAGC TCGCCCTGTC GAGCGACTCC CTGCCGGAGG CGCGGCTGAA TGATCTTGCG
GCCAATTTCA TTCGTCCGCA GCTTGCGAGC ATTCCCGGCG CGCAAATGCC CTCGCCCTAT
GGCGGCGCAG CGCGGCAGGC GCAAATCGAC CTCGATCAGA AGGCGCTGCG CGCGCATAAT
CTTTCGGCGC AGGACGTCGT CGACGCGCTC GTCCGGCAGA ACATCATCAC CCCCGTCGGA
ACCCAGAAGA TCGGCCGCTA CGAATATACG ATCGACCTCA ACGATTCGCC GAAGCGGCTT
CAGGAATTCA ACGACATCCC GATCAAGGTG GTGAACGGCG CTGTTGTCTT CATGCGCGAC
GTCGCCTTCG TCCATGACGG CTCACCGCCG CAGACCAACA TCGTACAGAT GGACGGCGCA
AAGGGGGTGC TCATCTCAGT CGTCAAGAAC GGATCGGCCT CAACCCTCGA CATCATCGAC
GGCGTCAAGA CGGCGATTCC CGCGATCGAA GCCTCGCTTC CGCCCGGCGT CCGGCTGAGG
CTCGTCAACG ACCAATCCGC TTTCGTCAAA TCCTCCGTGA CAAATGTCGT GAGAGAGGGC
GTCATCGCGG CGAGCCTCAC CGGCCTGATG ATCCTCGTCT TTCTCGGCAG CTGGCGGTCG
ACGCTGATCA TCACGATCTC GATCCCCCTC GCGATCCTGA GCTCGCTCGT CTTTCTGTCG
CTGACCGGGC AGACGATCAA CGTCATGACG CTCGGCGGCC TAGCCCTCGC CGTCGGCATT
CTCGTCGACG ACGCGACCGT CACCATCGAG AACATCAACC GGCATCTTCA TCGCGGCGAA
GACATCGAGA CGGCCATCGT CGAGGGCGCG CGGGAGATCA TGCCGCCCGC CACGGTCTCG
CTGCTTTGCA TCTGCATCGC CTTCGTCCCG CTGCTCTCGC TGGACGGCGT CGCCGGCTAT
CTGTTCCGGC CGCTCGCCAC TGCCGTCGTC TCGGCGATGG TCGCCTCCTA CGTTCTCACC
TACACGCTAA CGCCGACGAT GGCGCGCGCG CTGCTGAGCC ACGCATCGCC GGCGCATGGA
GACGGAGCGC CGCAATCGCG GTTCGAGCGC GCGTTCGAGG CCGTGCAATC GCGCTACGCC
GCGTTGCTCA GCTGGGCGAT CGACAATCGC AAAGCGTTTG TCGCCGGCTT CCTGTGTTTT
TGCGTCGCCT CTTTGCTTCT CATTCCCTTT CTCGGCCAGG AGTTCTTCCC TTCCGTCGAC
GCCGGGATTC TGCGCATCCA CATGCGCGCC CATGCGGGGA CGCGGATCGA GGAGACTGCG
CGCATCGCCA GCGAGGTCGA ACAGGAAATC CGCAAAGCGA TTCCGAGGGA CCAGCTCGAG
TCGATCGTCG ATAACATCGG GATGCCGAAC AGTGGCATCA ATCTGTCCTA CGCAAATTCG
GGGACGATCG GCGTGAGCGA CGCGGACATA TTGGTCACGC TCGCGCCCGG CGAAGAATTG
GTCGCGACCT ATGAGACGGC CTTGCGGCAG CGGTTGCGGA ACGCCTTTCC GGGCGTGTCC
TTCGCGTTTC TGCCCGGCGA CATGGTCACA CAGATTTTGA ATTTCGGCGC GCCCGCACCG
ATCGACGTAC AGATCGCCGG CTTCGACGCC GCGGCCGACA GGGCGTATGC GGACACCCTA
TTCGAGCGCA TTAATCACGT GCCCGGCGCG GCCGACGCGC GCGTGCAGCA GGTCTTCGCG
GCGCCGGCGC TCAAGGTCGA TTTCAACCGC GATCTGGCCG GCGTCGTCGG GCTGACCGAG
CATGACGCAT CGACAAGCCT GCAGGACACC TTGTCCGGCA GCAGTCAGAG CACGCCCGTC
TACTGGCTGA ACCCATCGAA CGGCGTATCC TATCCCGTTT CGATCCAGAC GCCGCAATAT
GCGATCGACA CCTTGCCGGG CCTTCAGAAC GTCCTTGTCT CTGGACCCAG CGACTCGCAG
CTCCTCGGCG CCGTCGCGAC CTTCACCCCG GAGCCGGCGC CAAGCGTCGT CACTCACTAC
AACATCCGGC CAGCGATCGA CATTTACGCT TCGGCGGCAG GCCGAGATCT CGGCGCCGTC
AGGGCCGATG TCGAAAAGAT CATCGCGGAA ACCCGCGCGG AGGCGCCAAT GGGCGCAACC
GTCACAATCC GCGGCGAGGC CGCCACAATG ACGAGCGCCT ATCGCCAGCT GTTGTTCGGC
CTTGGCTTCT CGATCCTGCT CATCTACCTG TTGATCGTCG TCAACTTCCA GTCGTGGCTC
GATCCTCTGG TCATCATTCT CGCCCTGCCG GCGGCGCTCG CCGGCATCGT CTGGATGTTA
TTCATCACGC GGACGCCGCT ATCTGCGCCG GCGCTGACCG GCGCCATCAT GTGCATGGGC
GTCGCCACCG CCAACAGCAT TCTCGTCATC AGCTTTGCCC GCGAAGAGCT CGCACGCGGC
GTCGAGCCGG CGGCGGCGGC GCTGGCGGCC GGGGCGGCGC GGTTTCGCCC TGTTCTGATG
ACGGCCCTCG CCATGATCAT CGGCATGGCG CCGATGGCGA TCGAACCCGG CCAGAACACG
CCGCTCGGAC GCGCCGTGAT CGGCGGACTG ATGCTCGCGA CCTGCGCGAC GCTGGTGTTC
GCGCCTGTCC TTTTCGCCCT GCTGCGCGCG CCTCGCGCTT CCTCCACTAC GGCCGTCGCG
AAGGCCGCCG CGGAGGCATT CCGCCTTCTT GAAGGAGATC CAATGCCGCT TTTCGCCATA
GCTCCGCCGT CGTCCGGACG CCTGCGGGTT CTGCTCCTCG GCTTTGCGCT CGCGGCTGTG
GGGATCGCCG TTTCGGGCGT GATGGTGCGC GCAAAAGGCG AGCAGGAAAT CGCCGCGCGG
ACCGAGGAGC TCGCCGTCCC CCGCGTGCGC CTCAAGACGC CGACGCCCGG TCCAAAGGAG
ACCGAGCTGA CGCTGCCGGG CGACGTCGCC GCCTTCAATA CGGGTTCGAT CTACGCCCGC
GCCAGCGGTT ACGTGACCGC CTGGAAGAAG GATATCGGCG ACCACGTCAA GAAAGGCGAC
GTCCTCGCGA CAATCAACTC GCCTGAGGTC GACCAGCAGC TGGCTCAGGC GCGCGCCGTC
CTCGTCAGCG CGGAGGCGGA CGCAAAACTC GCCAAGGTGA CCTCCGAAAG GTGGAGCAGC
CTCGTTGGCC GCAACATCGT CTCGAAGCAG GCGGATGACG AAAAGCAGGG CGCGCTCGCC
TCCAGGAACG CCTCTGTGGT CGCTGCGCAG GCGAATGTCG CGCGGCTCGA AGCGCTCGCC
TCCTTCGAGC GGCTCGAAGC GCCGTTCGAC GGCGTCGTGA CGGCGCGCAA TGTCGAGATC
GGCGATCTTG TCGACTCCGG CCAGAAGTCC GGCCAGCCCT TGTTCAAAGT CTCGGACATC
CATGCGATGC GCATCTACGT CAACGTCCCG CAAGCCTATA TCGGCTTTAT GCAGCCGGGG
CTTGAGGCGA CCCTCGATCT ACCGGGCCGG CGGCAAAAAT TCGAGGCGAG CCTCGTTTCG
ACGTCGGACT CCATCGCCAA GAGCTCACGC ACTGCGCTCG TCGAGCTTGA AGCCTCCAAT
CCCGACGGCA AGCTGTGGCC GGGCGCCTTC GTCGAGGTTC AATTTCATCT GCCGGGCGAT
CCCCGCGCCT TGCGGGTGCC GGCGACGGCG CTGATCTTCG GCCCTCACGG AATGAGCGTC
GCGACCGTGG GAGCCGGCGA CAAGGTCGTG ATCAAGCCCG TGCAGCTCGG CCGCGACCTT
GGCGAAGACG TCGAGGTGAG ATCCGGAATT AACGCCTCCG ACCGAATCAT CGACAGTCCG
CAGGAAACGC TTGCCGCCGG CGACATCGTT CGCCCCGTTG AAATGGCCGA CGCAGCCTCC
GCGCCGCCAG AGGTGGGCGG CGTGAAGACC GCTCCATTGG GCGCTCCGGT CCGGCAGGGC
CGATTATGA
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| Protein sequence | MMIGIVRLAL SRPLTFVVMA ILIAIYGALA ILKTPTDIFP NIGIPVVSVI WTYNGLPPGD
MAGRVISNYE RAVSTTVNDI EHIESQSFVT YGVVKIYFQP TVDVSAAQAQ VTAISQTILK
QLPAGINPPQ ILVYNASSVP IIQLALSSDS LPEARLNDLA ANFIRPQLAS IPGAQMPSPY
GGAARQAQID LDQKALRAHN LSAQDVVDAL VRQNIITPVG TQKIGRYEYT IDLNDSPKRL
QEFNDIPIKV VNGAVVFMRD VAFVHDGSPP QTNIVQMDGA KGVLISVVKN GSASTLDIID
GVKTAIPAIE ASLPPGVRLR LVNDQSAFVK SSVTNVVREG VIAASLTGLM ILVFLGSWRS
TLIITISIPL AILSSLVFLS LTGQTINVMT LGGLALAVGI LVDDATVTIE NINRHLHRGE
DIETAIVEGA REIMPPATVS LLCICIAFVP LLSLDGVAGY LFRPLATAVV SAMVASYVLT
YTLTPTMARA LLSHASPAHG DGAPQSRFER AFEAVQSRYA ALLSWAIDNR KAFVAGFLCF
CVASLLLIPF LGQEFFPSVD AGILRIHMRA HAGTRIEETA RIASEVEQEI RKAIPRDQLE
SIVDNIGMPN SGINLSYANS GTIGVSDADI LVTLAPGEEL VATYETALRQ RLRNAFPGVS
FAFLPGDMVT QILNFGAPAP IDVQIAGFDA AADRAYADTL FERINHVPGA ADARVQQVFA
APALKVDFNR DLAGVVGLTE HDASTSLQDT LSGSSQSTPV YWLNPSNGVS YPVSIQTPQY
AIDTLPGLQN VLVSGPSDSQ LLGAVATFTP EPAPSVVTHY NIRPAIDIYA SAAGRDLGAV
RADVEKIIAE TRAEAPMGAT VTIRGEAATM TSAYRQLLFG LGFSILLIYL LIVVNFQSWL
DPLVIILALP AALAGIVWML FITRTPLSAP ALTGAIMCMG VATANSILVI SFAREELARG
VEPAAAALAA GAARFRPVLM TALAMIIGMA PMAIEPGQNT PLGRAVIGGL MLATCATLVF
APVLFALLRA PRASSTTAVA KAAAEAFRLL EGDPMPLFAI APPSSGRLRV LLLGFALAAV
GIAVSGVMVR AKGEQEIAAR TEELAVPRVR LKTPTPGPKE TELTLPGDVA AFNTGSIYAR
ASGYVTAWKK DIGDHVKKGD VLATINSPEV DQQLAQARAV LVSAEADAKL AKVTSERWSS
LVGRNIVSKQ ADDEKQGALA SRNASVVAAQ ANVARLEALA SFERLEAPFD GVVTARNVEI
GDLVDSGQKS GQPLFKVSDI HAMRIYVNVP QAYIGFMQPG LEATLDLPGR RQKFEASLVS
TSDSIAKSSR TALVELEASN PDGKLWPGAF VEVQFHLPGD PRALRVPATA LIFGPHGMSV
ATVGAGDKVV IKPVQLGRDL GEDVEVRSGI NASDRIIDSP QETLAAGDIV RPVEMADAAS
APPEVGGVKT APLGAPVRQG RL
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