Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_3413 |
Symbol | |
ID | 7092139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 3745576 |
End bp | 3746286 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643466712 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_002363673 |
Protein GI | 217979526 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACGG ACATCAAAAC CGCAGCGCGC TGGCAAAGGC CGATCCTGAT CGTCGAGGAC GAATCCTTCG TCGCCAAGGC GATCGAGGAC GAACTGCGGG CGAACGGCTA TGAGTCCGTC GCCGTCAGCA CGGCCGAGGA TGGGTTTGAG GCGGCGCGCG CGCTGGACCC GATGTTGATT ATCGCGGATC GCATGTTGGC GGGAGTCGAC AGCCTGTCGA TCATCGAGCG GCTTCGGCGG GACGACGCCC ATCTCCCTGT TCTTTTCGTC AGCGGGCTTA CGGCGGTCGA TGAGCGCATA CGCGCGCTCA AGGCGGGCGG CGATGACTAT CTCACGAAAC CCTTCGCGCT GGGAGAACTC GCCGCCCGCG TCGACGCGTT GCTGCGCAGG AGCCAAAGCG CGCAGGACAC GGCCCTCGTC GTGGGGCCGC TCATGCTCGA TCGCATTTCG CGCATGGCGC AGCGCGGCGC GCGGGCGATC GCGCTTCTTC CGGCCGAATT CAAGCTGCTC GAATATATGA TGCGCCATGC TGGACAGACG CTCTCGCGCG CCATGCTGCT GGAGGACGTC TGGGGCTATC GTTCTCTCCC CAACACCAAC CTCATCGACG TGCATATCGG AAAGCTGCGC CGCAAGATCG ACGCCGCAGG CGAGACGCCG CTTATTCACA GCGTGCGCGG CGCCGGGTTC ACCCTGCAAT GGCGGCAGTG A
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Protein sequence | METDIKTAAR WQRPILIVED ESFVAKAIED ELRANGYESV AVSTAEDGFE AARALDPMLI IADRMLAGVD SLSIIERLRR DDAHLPVLFV SGLTAVDERI RALKAGGDDY LTKPFALGEL AARVDALLRR SQSAQDTALV VGPLMLDRIS RMAQRGARAI ALLPAEFKLL EYMMRHAGQT LSRAMLLEDV WGYRSLPNTN LIDVHIGKLR RKIDAAGETP LIHSVRGAGF TLQWRQ
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