Gene Msil_3413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_3413 
Symbol 
ID7092139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp3745576 
End bp3746286 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content65% 
IMG OID643466712 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002363673 
Protein GI217979526 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGG ACATCAAAAC CGCAGCGCGC TGGCAAAGGC CGATCCTGAT CGTCGAGGAC 
GAATCCTTCG TCGCCAAGGC GATCGAGGAC GAACTGCGGG CGAACGGCTA TGAGTCCGTC
GCCGTCAGCA CGGCCGAGGA TGGGTTTGAG GCGGCGCGCG CGCTGGACCC GATGTTGATT
ATCGCGGATC GCATGTTGGC GGGAGTCGAC AGCCTGTCGA TCATCGAGCG GCTTCGGCGG
GACGACGCCC ATCTCCCTGT TCTTTTCGTC AGCGGGCTTA CGGCGGTCGA TGAGCGCATA
CGCGCGCTCA AGGCGGGCGG CGATGACTAT CTCACGAAAC CCTTCGCGCT GGGAGAACTC
GCCGCCCGCG TCGACGCGTT GCTGCGCAGG AGCCAAAGCG CGCAGGACAC GGCCCTCGTC
GTGGGGCCGC TCATGCTCGA TCGCATTTCG CGCATGGCGC AGCGCGGCGC GCGGGCGATC
GCGCTTCTTC CGGCCGAATT CAAGCTGCTC GAATATATGA TGCGCCATGC TGGACAGACG
CTCTCGCGCG CCATGCTGCT GGAGGACGTC TGGGGCTATC GTTCTCTCCC CAACACCAAC
CTCATCGACG TGCATATCGG AAAGCTGCGC CGCAAGATCG ACGCCGCAGG CGAGACGCCG
CTTATTCACA GCGTGCGCGG CGCCGGGTTC ACCCTGCAAT GGCGGCAGTG A
 
Protein sequence
METDIKTAAR WQRPILIVED ESFVAKAIED ELRANGYESV AVSTAEDGFE AARALDPMLI 
IADRMLAGVD SLSIIERLRR DDAHLPVLFV SGLTAVDERI RALKAGGDDY LTKPFALGEL
AARVDALLRR SQSAQDTALV VGPLMLDRIS RMAQRGARAI ALLPAEFKLL EYMMRHAGQT
LSRAMLLEDV WGYRSLPNTN LIDVHIGKLR RKIDAAGETP LIHSVRGAGF TLQWRQ