| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3395 |
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| Symbol | |
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| ID | 7092121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 3726518 |
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| End bp | 3727687 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643466697 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002363658 |
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| Protein GI | 217979511 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCGGC TTCGACTTAT GCTGGCATTG CTTGGCGCAG CGGGCCTGGG CGCCGCGCTT
TATTTTTCTT GGCCGGAAAG GACGAAAGCT GCCCGCCCCG TACCCGGCCC GGTCCCGGTG
ATGGCGGCCA AGGCCGAGGC GAAGGATGTC CCAATCATCC TGCGAGGTCT TGGAATCGTC
ACTGCATTCA ATACCGTTGC GGTCACTAGC CGCGTCGAAG GCGCCATCAC AAAGATCAAC
TTCAAAGAAG GCCAATATGT TCGCACAGGC GATCTGCTGA TCCAGCTTGA CCCGCGGCCC
TTTCAAGCCG CGCTCGATCA GGCCAGCGCC AATCTCGCAA AAGATCAAGC CACATTGGCG
AACGCAAAGG TCGACCTGTC CCGTTACTCC AGTCTTTTGA CGCATAGCTT CGCGCCCGAG
CAGCAGGTGG CTACCCAAAA AACGACGGTG CAGCAAACCG AGGCGGCCGT GCAAAGCGAT
GAAGCCGCGA TCAAGGCGGC TCAGCTCAAC GTCGATTATG CAGCTCTGAG GTCGCCGATC
GACGGCGTGA CCGGTATTCG TCACGTCGAT ATCGGCAATT TGATCCAAGC GAACAATCAG
CAAAACCTCG TCACAATCAC GCAGATCGAG CCTATCTACG TCATCTTCAC GCTCCCGGAA
GTCGACATCG ACCGGGTTCG GCAGGCTATG AAAGAGGGTT CGCTAAAGGT CGAAGCTTAT
GCTTCGGACG ACAAACGCAA ACTGTCGGAG GGCGTGCTCG ATCTCATCGA CAACGCCGTT
GATCCAACGA CAGGAACAGT CAAACTTAAG GCGGAATTCG AAAATGCTGA TCAGACGCTT
TGGCCGGGCC AGTTCGTCAA TGCGCATGCC GTCCTGCGCA CGGTAAAGGA TGGGGTGACG
ATTCCAGCAG CCGCGGTGCA GACAGGGCCG AACGGCGCCT TCACCTACAA GATTGACGAT
GAGTCGAAGG CGGTTATGCA GCCAATAACG GTCGTGCAAA CGGAAGAGAA CCTAGCGCTT
GTGAGCGGCG CCCTCAAGGC TGGAGATCAG GTCATAACAA TCGGACAATT CAGGCTTCAG
CCTGGCGTAA AGGTTCGAGT CGAAGATCAC ATCCTGGACG CGGGACAGAC GCTGAGCGAC
GCGCCGGTCG GAACCGACGG CGTCCAATGA
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| Protein sequence | MFRLRLMLAL LGAAGLGAAL YFSWPERTKA ARPVPGPVPV MAAKAEAKDV PIILRGLGIV
TAFNTVAVTS RVEGAITKIN FKEGQYVRTG DLLIQLDPRP FQAALDQASA NLAKDQATLA
NAKVDLSRYS SLLTHSFAPE QQVATQKTTV QQTEAAVQSD EAAIKAAQLN VDYAALRSPI
DGVTGIRHVD IGNLIQANNQ QNLVTITQIE PIYVIFTLPE VDIDRVRQAM KEGSLKVEAY
ASDDKRKLSE GVLDLIDNAV DPTTGTVKLK AEFENADQTL WPGQFVNAHA VLRTVKDGVT
IPAAAVQTGP NGAFTYKIDD ESKAVMQPIT VVQTEENLAL VSGALKAGDQ VITIGQFRLQ
PGVKVRVEDH ILDAGQTLSD APVGTDGVQ
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