| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3387 |
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| Symbol | |
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| ID | 7092113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 3716562 |
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| End bp | 3718367 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643466691 |
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| Product | PQQ-dependent dehydrogenase, methanol/ethanol family |
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| Protein accession | YP_002363652 |
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| Protein GI | 217979505 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCATG TCGATAGCTG CCTGACACAA CGTGCGCTAG CGGTGGCCGC GTTCCTCGGC
GTGACCTCTG CCGCTTTTCT TGCAGAAGCG CAAACGCCGC CTCCTTTCGT CAAAGCCGAT
GCTGCGAAAG AATGGACCAT GCCGGCGAAA GACGTCGCCA GCACGCGTTA CAGCTCTCTC
GATCAGATCA ACGCCGGGAA CGCTCGGGAT CTTAAAGTCG CCTTTAGCTT TTCGCTTGGG
ACAGACCGAG GCGCGGAAGC CGCGCCGCTG GTCGTCGGCG ATACGATGTA TGTCGTAACG
CCCTATCCCA ACACCCTTTT CGCCCTGGAT CTGAAGCAGA GCGGGGCTTT GAAATGGCGC
TACGATCCTT TGCCGAGCGC GGCGTCGCAA GGAGAAGCTT GCTGCGACGT GGTCAATCGC
GGCGCAGTCT TCGCCGATGG AAAGCTCATC TATAACACGC TCGACGATTA TACGATCGCC
GTTGACGCCG CTTCGGGCAA GGAGGTCTGG CGAACCAAAA TGGGCGACAT CAACATGGGG
GAGACCATGA CGATGGCTCC TCTGCTTATG AAGGATAAGG TGCTTGTCGG AGATTCGGGC
GGCGAAATGG GCGTGCGCGG CTGGGGCGCT GCGCTTGACG TCAAGACGGG AAAGATCGTC
TGGCGCGCCT ACAGTACAGG CCCCGACTCC GACGTCCTGA TCGGCGCCGC GTTCAAGCCG
TTTTACGATT CGGATAAGGG CAAGGATCTG GGGGTCACAA CCTGGCCCGC CGACATGTGG
CGGCAGGGCG GCGGTTCTGT CTGGGGCTGG GCGTCGTACG ACCCGGAGCT CAATCTCGTC
TATTACGGCG TTTCAAATCC CGGCCCTTGG AATTCCTCGA TGAGGCCTGG CGACAATAAA
TGGACTTCCG GCATTTTTGC GCGCGACGCT GACACCGGGC AGGCGCGGTG GTTCTACCAA
TACAGCCCAC ACGATCTCTA CGATTACGAC GGGGTCAACG AAGAGATCCT GCTCGACATG
CCGTGGAAAG GGCAGCCGCG AAAGGTGCTG GTTCATCCAG ACCGCAACGG TTATGTTTAT
GTCCTTGACC GCGTAAACGG CGAAGTCCTT TCCGCTGAGC CATTTCAGAA AATCACGAGC
TCCACGGGCG TCGATTTGAA GACCGGAAGG CTTCAATATG TCGCCGCCAA GCAACCGAAG
CTTGGTGAAA CTGTCCGGGA TATTTGTCCG GCGCCGCCCG GCGCCAAGGA TTGGCAGCCC
TCCGCATTCT CGAACAAGAC AAAGCTGCTC TATCTTCCGC ACAACAATCT ATGTTTCGAT
ACCGAGGAAG AAGACGTCGG CTATATCGCC GGCACACCCT ACGTCGGAGC AAGCATTCAT
ATGCATGCAG GCGAAGGCGA AAATCGCGGC GAATATGCCG CCTGGGATAT TCTGAACGGC
AAGAAAGTCT GGGCGATACA GGAACGATTT CCCGTCTGGA GCGGAACCGT AGTCACGGCC
GGGGACGTCG CCTTCTACGG CACGATGGAC GGATGGTTTA AGGCGATCAA CGCCAATACG
GGCGAACTCC TCTGGCAGTT CAAGACGGGT TCCGGCATCA TCGGGCAGCC AGTGACCTAT
CTTGGTCCGG ATGGGAAGCA ATATGTCGCC GTCCTATCGG GCGTTGGCGG ATGGTCCGGC
GCGATCGTGG CCGGCGGCAT CGACAAGCGC GACGGCACCG CCGCGCTCGG TTTCGTCAAC
GCAATGAAGG ATCTGCCCGA GGTGACCACC AAGGGAGGCG AGCTGTATGT CTTCGCGCTT
CCTTAG
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| Protein sequence | MVHVDSCLTQ RALAVAAFLG VTSAAFLAEA QTPPPFVKAD AAKEWTMPAK DVASTRYSSL
DQINAGNARD LKVAFSFSLG TDRGAEAAPL VVGDTMYVVT PYPNTLFALD LKQSGALKWR
YDPLPSAASQ GEACCDVVNR GAVFADGKLI YNTLDDYTIA VDAASGKEVW RTKMGDINMG
ETMTMAPLLM KDKVLVGDSG GEMGVRGWGA ALDVKTGKIV WRAYSTGPDS DVLIGAAFKP
FYDSDKGKDL GVTTWPADMW RQGGGSVWGW ASYDPELNLV YYGVSNPGPW NSSMRPGDNK
WTSGIFARDA DTGQARWFYQ YSPHDLYDYD GVNEEILLDM PWKGQPRKVL VHPDRNGYVY
VLDRVNGEVL SAEPFQKITS STGVDLKTGR LQYVAAKQPK LGETVRDICP APPGAKDWQP
SAFSNKTKLL YLPHNNLCFD TEEEDVGYIA GTPYVGASIH MHAGEGENRG EYAAWDILNG
KKVWAIQERF PVWSGTVVTA GDVAFYGTMD GWFKAINANT GELLWQFKTG SGIIGQPVTY
LGPDGKQYVA VLSGVGGWSG AIVAGGIDKR DGTAALGFVN AMKDLPEVTT KGGELYVFAL
P
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