Gene Msil_3380 details

Gene Information

• Locus tag: Msil_3380
• ID: 7092106
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylocella silvestris BL2
• Kingdom: Bacteria
• Replicon accession: NC_011666
• Strand: +
• Start bp: 3711133
• End bp: 3713085
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 643466684
• Product: cytochrome c oxidase, subunit I
• Protein accession: YP_002363645
• Protein GI: 217979498
• COG category: [C] Energy production and conversion
• COG ID: [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1
• TIGRFAM ID: [TIGR02891] cytochrome c oxidase, subunit I

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 44
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCAAGCC GGCATTTGAC AATGAATATG CCCCCTCTGG TCGCACCCTC TCCGGAGCTT 
GAGGGCCGCC TGCGCGCGGC ATGGAAAACG GAGCCGGGAT GGCGCGGCTT TTTCACGACC 
GTCGATCATA AGGAGATCGG CCTTCGCTAC ATCGTCACCG CCTTCGCGTT TCTCATTATC 
GGCGGCCTGG AGGCGCTGGT GATGCGCCTG CAGTTGGCAG CGCCGAATAT GAGCCTGCTC 
ACCCCGGAGC AATATAATCA GCTCTTCACA ATGCATGGCG TCTCGATGAT TTTTCTGTAC 
GCCATGCCGA TCCTGTCGGG TTTTAGCAAT TATCTGTGGC CGCTCCTGCT TGGCTCGCGG 
GACATGGCGT TTCCGCGAGT CAACGCGCTT TCCTACTGGA CCTACATTTT CGCCGGTTTG 
TTTATCTATG CGAGCTTCAT GCTCGGCGTC GCACCCAACG CCGGCTGGTT CAATTACGTC 
CCGTTGTCCG GGCAAAACGC CAACCCTGGG ATCAACATCG ATTTTTACGC GTTGGGCATG 
ATCCTGCTCG GCATTTCAAC GACCGTTGGC TCCGTCAACT TCGTCGTTAC CCTGATGCGC 
ATGCGCGCCC CTGGCATGTC CGTCAATCGC TTGCCGGTGC TGGTTTGGGG CACTTTGACC 
GCCTCCATCG CGAATATAGT CGTCGTGCCA AGCGTCAGCC TCGCATTCTT GATGCTATGG 
CTCGATCGCA ATTTCGGCTC GCATTTCTTT ACCGTCGGCG ACGGCGGCCA GCCAATTCTC 
TGGCAGCATT TGTTTTGGAT GTTCGGCCAT CCGTGGGTCT ATGCGATTGT CCTGCCGGCG 
ATGGGATTTG TTTCCGACGG CCTGCCGATT TTCTGCCGCA GGCCGATCGT CGGCTACACG 
CTTGTGGCGC TATCGACTGT TGCGACCATG GCGCTTGGCT TCGGCGTCTG GGTCCACCAT 
ATGTTTGCGA CCGGCATTTC GAACCTGGCT TTGTCCTTCT TCAGCGGCGC CTCCCTTGTG 
ATAACCGTGC CGAGCGCGAT TGCAGTTTTC TGCTGGATTG CGACAATCTG GTCAGGTCGA 
CCCGTCGCCA CCGCGGCGTT CCATTTTTAT GCCGGCATGA TCGGGCTCTT TGTCATTGGC 
GGCGTCTCTG GCTTCATGAC GGCGTCGGTT CCCGTCGATT GGCAGCTTAC AGACACCTAT 
TTTATTGTCG GACATATCCA CTACGTGCTG ATTGGCATCA ACGTATTTCC AGTGATCGGC 
GCCTTCTACA CATGGTTCCC TAAAATAACC GGCCGCATGC TCGACGAAAG ATTGGGCAAA 
TGGAATTTTT GGCTGATGTT CGTCGGATTC AACCTCGGCT TTTTGCCGAT GCATATTTCC 
GGTCTGCGGG GAATGCCGCG CCGGATCTAC ACCTATGGGC CCGATATGGG ATGGTCGACG 
CTCAATCTCA TCACGTCGAT CGGATCGTTT CTGTTCGCCG CCGGCGTGCT TCTCTTCATC 
CTCAATGTTG CGATAAGTCT GCGCCGCGGC GCGCCGGCCG GCGCAAATCC CTGGGACGCC 
GGCACGCTCG AATGGCTGAC CGCTTCTCCG CCGCCGCCCC ATAATTTCAC GGTAATTCCA 
CAAATCGGAA GCCGCCACCC CTTGTGGGAA GACCATCTAG ACGACGCTGG AGCGTCGATT 
ATCGATCGCG GCCTCGCGCT CGATGATGGA CGCGAGACAA TCGGAGTTAC CGTGCTGGAC 
GGCGAGCCGG ATGTCATCCT GCGCATGCCT GGAGACAGCT GGCTTCCGTT CCTGCTCGGC 
CTTGCTTCGA CCGGCGTGTT TATCGGCATG CTGACTCACT TGTGGATACT GGCGGGAATC 
GCCCTCATCG GCTGCTTTCT CGTTCTGGCC GCATGGCTAC AGCCGGCGCC GCTGCCGCCG 
ATGCAATTGA TCGCGGAGGC GGAGCATGTC TAA 

 

Protein sequence

MASRHLTMNM PPLVAPSPEL EGRLRAAWKT EPGWRGFFTT VDHKEIGLRY IVTAFAFLII 
GGLEALVMRL QLAAPNMSLL TPEQYNQLFT MHGVSMIFLY AMPILSGFSN YLWPLLLGSR 
DMAFPRVNAL SYWTYIFAGL FIYASFMLGV APNAGWFNYV PLSGQNANPG INIDFYALGM 
ILLGISTTVG SVNFVVTLMR MRAPGMSVNR LPVLVWGTLT ASIANIVVVP SVSLAFLMLW 
LDRNFGSHFF TVGDGGQPIL WQHLFWMFGH PWVYAIVLPA MGFVSDGLPI FCRRPIVGYT 
LVALSTVATM ALGFGVWVHH MFATGISNLA LSFFSGASLV ITVPSAIAVF CWIATIWSGR 
PVATAAFHFY AGMIGLFVIG GVSGFMTASV PVDWQLTDTY FIVGHIHYVL IGINVFPVIG 
AFYTWFPKIT GRMLDERLGK WNFWLMFVGF NLGFLPMHIS GLRGMPRRIY TYGPDMGWST 
LNLITSIGSF LFAAGVLLFI LNVAISLRRG APAGANPWDA GTLEWLTASP PPPHNFTVIP 
QIGSRHPLWE DHLDDAGASI IDRGLALDDG RETIGVTVLD GEPDVILRMP GDSWLPFLLG 
LASTGVFIGM LTHLWILAGI ALIGCFLVLA AWLQPAPLPP MQLIAEAEHV