Gene Msil_3348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_3348 
Symbol 
ID7090845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp3680185 
End bp3680901 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content58% 
IMG OID643466655 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_002363616 
Protein GI217979469 
COG category[K] Transcription 
COG ID[COG2771] DNA-binding HTH domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCATG ATCTGATCGA GCAAATTGAG GGCTGTTGGG CCGATGGCGG ATTAGAAGAG 
CTGCTGGAGC TCGTCTGCCG CAGCTATGAT CTGTTTTCCG TCATATATAT CTGCCCGTCT
TTCATCGGAT TCAGTCTTTC CGCTCCGTTT ATTGTTCAAC CGCCTTGCCG AGGTTGGGCC
GATCAGCAAA AAATCCAGTC GCTCCTGTCG ACGGATCCGA TGGTTCGGGC GATGTCGCGC
ACTGTGCTGC CGATGGACTG GGCCGCTCTT CGGCAAAAGA GCGCGCACGA AACCGGAATT
CACTTCCTGC CGGGCGAGGA TGGCGCTCTG CGGCAAGGCC TGACGATCCC TGTGCGTGGT
CCCTCGAACA GTGTTTGGGG GCTTTTCATC GCTACATCGA ACGAAAGCGA AATTTGCTGG
GCGTCACGTC GGCATGAGCT GATGATCGAC CTGGCTCATA TCGCGCATTA TGTCCATAAG
CGCGCATGCG ACATACATGG CGAGGGGCAC ACGATCGATC TCAGCACGAT CACGCGCCGC
GAGATCGAGG CGCTCGCGCT TGTGGCGCAA GGCAAAAAGC CTGGCGAGAT CGCAATGCTC
ATGCGAATTT CGAACGACAC GGTCAAGGCG CATCTCGATT CGGCCCGCGA CAAGCTACAG
GCGCTCAATC GCGTACATGC GGCCGCAAAG GCGCTGCGAG CCGGGCTCAT TTCATGA
 
Protein sequence
MNHDLIEQIE GCWADGGLEE LLELVCRSYD LFSVIYICPS FIGFSLSAPF IVQPPCRGWA 
DQQKIQSLLS TDPMVRAMSR TVLPMDWAAL RQKSAHETGI HFLPGEDGAL RQGLTIPVRG
PSNSVWGLFI ATSNESEICW ASRRHELMID LAHIAHYVHK RACDIHGEGH TIDLSTITRR
EIEALALVAQ GKKPGEIAML MRISNDTVKA HLDSARDKLQ ALNRVHAAAK ALRAGLIS