Gene Msil_3327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_3327 
Symbol 
ID7090823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp3660064 
End bp3660750 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content61% 
IMG OID643466634 
Productformate dehydrogenase, gamma subunit 
Protein accessionYP_002363595 
Protein GI217979448 
COG category[C] Energy production and conversion 
COG ID[COG2864] Cytochrome b subunit of formate dehydrogenase 
TIGRFAM ID[TIGR01583] formate dehydrogenase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.582941 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTATC CCAAGGGAAC ATTCATCCGC AATACGACCG TGACGCGGAT AAATCACTGG 
CTCACGGGCG GCTGTTTCGT GCTGCTGGTC TTGTCCGGCC TCTCGATGTT CGACCCGATG
CTGTTCTTTC TGTCGGGCCT GTTCGGCGGG GGCCAGTCGG CGCGCGCGAT CCATCCGTGG
ATCGGCTGCG TGCTTCTCGT GAGCTACCTC GGTCTGATGA TCCAGTTCTG GCGCGACAAT
ATGTGGAATC GCGACGATCT CGCCTGGATG AAGGCGATCG ACAAGGTCCT CGTCAATGAG
GAGGAGGGGG TTCCCGAAGT CGGCCGCTTC AACGCCGGCC AGAAATTCGT GTTCTGGTCG
ATGGCGCTGT TGGTGCCTGT GCTTTTCTTG ACCGGCCTCG TCATCTGGGA ATATTATTTT
TCAACCTACA CTACAATCGA GCTGCAGCGC GCGGCCGTGC TGATCCACAG CCTCGCCGCC
TTCGCCGCGA TCATTGTCTG GATCATTCAT GTCTATGCCG CGATCTGGGT CAGGGGCTCG
ATGCGGGCGA TGACGCAAGG CTATGTTACG CCGGGCTGGG CGTTCCGGCA TCACCGCAAA
TGGCTGCGCA GCCTCATCGC GACGAACTCG ATCGGGCCGC GGCCGCGGAC CGGCGACGAT
TCGCCAAGGC CATTGGAGCG CCCATGA
 
Protein sequence
MTYPKGTFIR NTTVTRINHW LTGGCFVLLV LSGLSMFDPM LFFLSGLFGG GQSARAIHPW 
IGCVLLVSYL GLMIQFWRDN MWNRDDLAWM KAIDKVLVNE EEGVPEVGRF NAGQKFVFWS
MALLVPVLFL TGLVIWEYYF STYTTIELQR AAVLIHSLAA FAAIIVWIIH VYAAIWVRGS
MRAMTQGYVT PGWAFRHHRK WLRSLIATNS IGPRPRTGDD SPRPLERP