Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_3302 |
Symbol | |
ID | 7090798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 3623368 |
End bp | 3624120 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643466610 |
Product | Extensin family protein |
Protein accession | YP_002363571 |
Protein GI | 217979424 |
COG category | [S] Function unknown |
COG ID | [COG3921] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.000699012 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCTCGCCG TCGTCGCGGC GATCAACGCA AATTGCGGCC GGGCGGCCGC GATGGACGAT GGTGGCGGAC CGCCGCTGCC GCCGAGGCGC CCGCCGGCGG CCTCAGCTTT CCCCTCGGCG CCCGCCGCCC CGAGCGCCCC TCCGGCCGCT CCGGCGCCGC CTCCTCCGCC CGCAGCGGCG AATCAGCCGC CAGCGGCGGA CGATTGCCGG GTGGGCCTTG CCTCCCGCGG CGTCACCCTA AAGCCTGTGG AGCAAGCATC ACCGGCCGAT CCTCGCTGCG TGATCGCGAC GCCAGTCCAG CTCATCTCCT TGACGCTGCG CAACGGCCAG CGCGTCGATC TGCCCGATCG CCCGACGCTC GACTGCCCAA CTGCTGCAAC TTTCGCGGAT TTTGTCGACG AGTTGCTGGC GCCTCTCGCC AAGGGGTCTT TCGACGCGAC CATCATAGCC ATCGGAACCG GCCCCGGCTT CGATTGCAGA TCCCGCAACC ACATCGCCGA CAGCAAGCTG AGCGCTCATG CAAAGGGGCT AGCGATCGAC ATCGCGGCGC TGCATTTCGC GGGCGGACGC CTTTACGAAG TCGGCCGATT GGCCGATGCG CCGGAGCGCG CCTTCGATCA TGCCGCCCGC GCCGCCGCCT GCGGTTATTT CCACACGGCG CTCGGGCCCG GCGCCGACGC CTTTCACAGC TCGCATTGGC ATTTCGACCT CGAAACCCGG GGCTCCGACG GAAAAGCGAA ATTCTGTCAG TAG
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Protein sequence | MLAVVAAINA NCGRAAAMDD GGGPPLPPRR PPAASAFPSA PAAPSAPPAA PAPPPPPAAA NQPPAADDCR VGLASRGVTL KPVEQASPAD PRCVIATPVQ LISLTLRNGQ RVDLPDRPTL DCPTAATFAD FVDELLAPLA KGSFDATIIA IGTGPGFDCR SRNHIADSKL SAHAKGLAID IAALHFAGGR LYEVGRLADA PERAFDHAAR AAACGYFHTA LGPGADAFHS SHWHFDLETR GSDGKAKFCQ
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