| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3279 |
|---|
| Symbol | |
|---|
| ID | 7090775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 3600884 |
|---|
| End bp | 3602047 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643466587 |
|---|
| Product | gamma-glutamyl kinase |
|---|
| Protein accession | YP_002363548 |
|---|
| Protein GI | 217979401 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0263] Glutamate 5-kinase |
|---|
| TIGRFAM ID | [TIGR01027] glutamate 5-kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.0202139 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGGT CCTCGGCGGC GATGCTGGCG AGCGCGCTGC CGAGCCTTGA ACGCTTCCGC
CGCATCGTCA TCAAGGTCGG CTCGTCGCTG CTGGTCGACC GCGCGGAGGG GCGCGTCAAG
CGGGAATGGC TCGTCTGCCT CGCCGAGGAT ATTGCCGCGC TGCATCGGCT GGGCGCGGAT
GTGCTCGTGG TCTCGTCGGG GTCGATCGCG CTCGGGCGCA CCGTCCTCGG CCTGCCGGAC
GGCGCTCTAA AACTTGAGGA CAGCCAGGCC GCCGCAGCCG TCGGCCAGAT TGCGCTCGCC
CGCATCTGGG CCGAGACGCT CGCCTCGCAT GAGATCACGG CCGGGCAGAT CCTCGTCACC
TATGGCGATA CGGAGCAGCG CCGGCGCTAT CTCAATGCGC GCGCGACCAT CGGCCGCCTG
CTGGATCTTC GCGCCGTGCC CGTCATCAAC GAGAACGACA CGGTCGCGAC CTCGGAAATC
CGCTATGGCG ACAATGACCG GCTCGCCGCC CGCGTCGCGA CGATGGCCAG CGCCGATCTG
CTCATTCTTC TGTCCGATGT TCCCGGCCTC TATACGGCGC CGCCAAGCGA GGATCCGAAC
GCTTCGCTCG TCCCGGTGGT GCCGCGCGTC ACCGCCGAGA TCGAGGCGAT GGCGGGAGGA
GCCGCGTCAC ATCTGTCGCG CGGCGGCATG CGCACCAAGA TCGAGGCGGC CAAGATCGCG
ACCACCGGCG GCGCGCATAT GCTGATCGCC GACGGGCGCA TCGCCCATCC GATCGAGCGG
ATCAAGCAAG GCGCGCCCTG CACCTGGTTC CTCACCGGCT CCAGCCCGAT CACGGCGCGC
AAGAAATGGA TCGCCGGCTC GGTCGAGCCG CGCGGCGCAC TGCATCTCGA CGCCGGGGCG
GAACGGGCGA TCCGCGCCGG CGCCAGCCTG CTGCCGGCCG GAGTCGTAAA AGTCGAGGGC
GACTTCTCGC GCGGCGATTG CGTCATCATG CGCAATGTTG CGGGCGGCGA GATCGGACGC
GGCCTCGTCG CTTATGATTC TGGCGACGCG GTCCTCATCG CCGGCCATAA TTCGCAAGAT
CTCGAAGCGA TCTTGGGCGG CCCACAGCGC CCGGTCCTCA TTCATCGCGA CGACATGGTG
GTCGCGGGCG AAAGAATGGG GTGA
|
|---|
| Protein sequence | MTRSSAAMLA SALPSLERFR RIVIKVGSSL LVDRAEGRVK REWLVCLAED IAALHRLGAD
VLVVSSGSIA LGRTVLGLPD GALKLEDSQA AAAVGQIALA RIWAETLASH EITAGQILVT
YGDTEQRRRY LNARATIGRL LDLRAVPVIN ENDTVATSEI RYGDNDRLAA RVATMASADL
LILLSDVPGL YTAPPSEDPN ASLVPVVPRV TAEIEAMAGG AASHLSRGGM RTKIEAAKIA
TTGGAHMLIA DGRIAHPIER IKQGAPCTWF LTGSSPITAR KKWIAGSVEP RGALHLDAGA
ERAIRAGASL LPAGVVKVEG DFSRGDCVIM RNVAGGEIGR GLVAYDSGDA VLIAGHNSQD
LEAILGGPQR PVLIHRDDMV VAGERMG
|
|---|
| |