Gene Msil_3200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_3200 
Symbol 
ID7090615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp3515244 
End bp3516056 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content65% 
IMG OID643466508 
ProductExtradiol ring-cleavage dioxygenase class III protein subunit B 
Protein accessionYP_002363469 
Protein GI217979322 
COG category[S] Function unknown 
COG ID[COG3384] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.523275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA ATCGTCTGCC GGTCTGGTTC ATTCCGCATG GCGGCGGTCC CTGCTTTTTC 
ATGGACCCGC CGCCGAAAGC CCCCGACGCC TGGAAGAAAA TGGAAGCCTA TCTGCGCGGG
ATTTCGGCTG CGGCCGGCGC CCGCCCGCGC GCGATCCTGA TTATCTCCGG CCATTGGCTT
GAGAAGCGCC CGACCGTGAC GGCAGGCGCC AATCCGCCGT TGATCTATGA CTATCAAGGC
TTCCCGAAAC ACACTTATGA GCTGCGCTAT CCGGCGCCGG GCGACCCTAG GCTCGCCGCG
GAGGTTGTCG CGCGGCTGAA ACAGGCCGGG ATCGAGGCCG GCGAGGACAA GGAGCGCGGC
TTCGACCACG GCGTCTTCAT TCCGCTGCTG CTGCTCTATC CGCAGGCGGA CATCCCGGTC
GTGCAGCTCT CCCTCGTCGA CTCGATGGAT CCGAAAACGC ACATCGCCAT CGGCGAGGCC
CTTGCGCCCC TGCGCGACGA CGGCGTGCTG ATCATCGGCA GCGGCATGAG CTTCCACAAT
TTGCAGAATT TTTACGGCGC CGATCCGCGC CTTTTGCAGA TTGCGGAAAA ATTCGACGCC
TTCCTCCATG AGGCAATCGG CCTTGACCCG GCCCCGCGCG CACAGGCGCT GGCCGGATGG
GACAACGCGC CGGGCGCGCG CATCAGCCAG CCGCATGAGG ACCATCTGAT TCCGCTGATG
GTCGCCGCCG GCGCCGCCGG CGCCGACAGA GGCGTGCGCG ATTATTACGA CCATGTCTTC
GGCGCGCCGA TTTCCGGCTA CCGCTTCGGG TAG
 
Protein sequence
MSANRLPVWF IPHGGGPCFF MDPPPKAPDA WKKMEAYLRG ISAAAGARPR AILIISGHWL 
EKRPTVTAGA NPPLIYDYQG FPKHTYELRY PAPGDPRLAA EVVARLKQAG IEAGEDKERG
FDHGVFIPLL LLYPQADIPV VQLSLVDSMD PKTHIAIGEA LAPLRDDGVL IIGSGMSFHN
LQNFYGADPR LLQIAEKFDA FLHEAIGLDP APRAQALAGW DNAPGARISQ PHEDHLIPLM
VAAGAAGADR GVRDYYDHVF GAPISGYRFG