Gene Msil_3160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_3160 
Symbol 
ID7093820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp3474265 
End bp3475344 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content62% 
IMG OID643466469 
ProductDNA-directed DNA polymerase 
Protein accessionYP_002363430 
Protein GI217979283 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCCG CACAGCGACG CAAGATCATC CATATCGACA TGGACGCCTT TTTCGCATCG 
GTCGAACAGC GCGACAATCC GGAGCTTCGC GGCAAGCCGG TCGCCGTCGG CGGTTCGAGC
CAACGGGGCG TCGTCGCCGC GGCAAGCTAT GAGGCGCGCG CATTCGGCGT GCGCTCGGCG
ATGCCCTCGG TCACGGCGCG ACGGAAATGT CCCGAGCTGA TTTTCGTCAA GCCGCGTTTC
GACGTCTACC GCGCGGTCTC GGACGAGATG CGCGCGATCT TCGCCGAATA TACGCCGATC
ATCGAGCCCC TATCGCTCGA TGAAGCCTAT CTCGATGTGA GCGAAACTCT GAATGGCGCC
CTGTCGGCGA CCGAGATCGC GCAGCAGATC CGCGCGAAAA TCCGCGAGCG GACGAATCTC
ACAGCGTCCG CCGGCGTCTC CTACAACAAG TTTCTGGCCA AGCTCGCCTC GGATCATCGC
AAGCCCGACG GATTGTTTGT GATCACGCCG AAGATGGGGC CCGCCTTTGT CGAGCCGTTG
CCGGTGCGAA AATTTCATGG CGTCGGTCCG GCGACCGCGG CCAAGATGAA GCGGCTTGGG
ATCGAGACCG GGTTCGATTT GAAGGCGCAG TCTCTGGCCT TCATGCAACA GCAATTCGGC
AAAGCCGGAC CCTATTATTA TGGCGTCGCG CGCGGCGTCG ACGAAAGGCC GGTTCGCGCC
CATCGCATTC GGAAATCCGT CGGCGCCGAA AACACATTTT TCGCCGATCT CTTCACCTTT
GAAGCGGCGC GCGAGGCGAT GGAACCGATC GTCGACAAGG TCTGGCGCCA TTGCGAGACC
GCGGGCGCGC ATGGCCGCAC GCTGACCCTC AAAGTCAAAT ATGCCGATTT TCAGCAGATC
ACCCGGAGCC GGACCGGCAT GACGCCGTTT GCGACGCGCG CCGAGCTCGA ACGCCAAAGC
CTCGATCTCC TCGCCCCGCT GTTTCCCTGC GACAAGGGCG TCCGGCTTCT CGGCGTGTCA
TTGTCCTCGC TGGATTTCGC GCAGGAGAGC GAGACGCTCC AATTGAGCCT CGGCTTGTAG
 
Protein sequence
MEPAQRRKII HIDMDAFFAS VEQRDNPELR GKPVAVGGSS QRGVVAAASY EARAFGVRSA 
MPSVTARRKC PELIFVKPRF DVYRAVSDEM RAIFAEYTPI IEPLSLDEAY LDVSETLNGA
LSATEIAQQI RAKIRERTNL TASAGVSYNK FLAKLASDHR KPDGLFVITP KMGPAFVEPL
PVRKFHGVGP ATAAKMKRLG IETGFDLKAQ SLAFMQQQFG KAGPYYYGVA RGVDERPVRA
HRIRKSVGAE NTFFADLFTF EAAREAMEPI VDKVWRHCET AGAHGRTLTL KVKYADFQQI
TRSRTGMTPF ATRAELERQS LDLLAPLFPC DKGVRLLGVS LSSLDFAQES ETLQLSLGL