Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_3149 |
Symbol | |
ID | 7093809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 3460200 |
End bp | 3462095 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643466459 |
Product | PQQ-dependent dehydrogenase, methanol/ethanol family |
Protein accession | YP_002363420 |
Protein GI | 217979273 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4993] Glucose dehydrogenase |
TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTAC GGAAAAGTTT ACCGTGGCGC GCGGCCTTCG CCGGTTTGGC GATGGCGTCG CTGTCGGGCG CCGCCTGGGC CGGCTCCGAT GAAGAAATCA TAAAGAACAG CAAGAATCCG GATCTCTGGC CGGGGATGGG GCAAAATCTC GGCCTGCAGC GTCACAGCGA ATTGAAGGAC ATCAACAAGG ACAACGTCAG CAATCTTCAG ATGTCCTGGT CGCAATCCTC GGGAGCTCTG CGCGGACACG AAGGGCAGCC AGTCGTTGTC GACGTCGGCG GAAAGCCGAT GATGTTTTTC GTCAGCGCTT GGCCGAACAT CGTGCAGGCG CTCGATCTTT CGGACCCCGA CAATCCGGTT CAGGTCTGGT CCTACAACAA GGGGACCGAT CGCGATGTGT CCGCCGTGCC GCGCGCCTGC TGCGACGTGG TCAACCGCGG CGTGAACTAC GCCGATGGCA AGCTGCTGTT CAACACGCTG GACGGCTTCC TCATCGCGCT CGACGCCAAG ACCGGCCAAG AATTGTGGGT CGTCAAGCAC GCCTTTCCCG AACATGGCGA GACGGTGACG AGCGCGCCGT TGATCGCCAA GGACAAGGTG ATCGTCGGCT TCGGCGGCGA TGAATTCGCT GCGCGCGGAC GGCTCGAAGC CTATGACCTC GCGACCGGCG ACCTCGCCTG GCGGTGCCAG AGCAATGGGA CGGACAAGGA CGTCTGCCTG ACCCCCGACA CCAACAAGGC GCATCCCGAA CATGGGACTT ATGGCCACGA TATCGGCCTC TCGAGCTATC CCGGCGACGA GTGGAAGCGT GGCGGCGGGT CGCCCTGGGC CTGGTACAGC TATGATCCCG AGCTCGGCCT TGTTTACGCC TCCACCGGCA ACCCGGGGAA CTGGAGCCCG ACGACGCGTT GCGGCGCCGA CACGGATGCG GAATGCAATT CAGGCAAATG GGACAACAAA TGGTCGATGA CGATCTTCGC CCGCAAGGTC GACACCGGCG AAGTCGTCTG GGCCTACCAG ATGACGCCTT TCGATCAATG GGACTATGAC GGCGTCAACG AGAATATCCT TGTCGACATG CCGAATGTCG ACGGCAAGCC CGTCAAGGCG CTTGTGCACT TCGATCGCAA CGGCTTCGCC TATGTCCTCG ATCGGACAGA CGGCAATCTC CTGCGCGCCC ACAAATTCGT CACCGTAAAC TGGGCCGAAA AAGTCGATCT CAAGACCGGA CGGCCGGTCA AGGTGCCGGA GCACTCACCC TTCAAGATCG GCGTCAACAC GCAGGCCTGT CCCTCGGCGA TGGGCGGCAA GGATCAGCAG CCGGCTTCGG TCGACCCCAA GGATCCAACC AATTTCTATG TGCCGACGAA CAATTGGTGC ATGGAAGATG AGCCCCAGGC CCGCACCCAT ACGCAGCAGG GCACGGTTTA TGTCTTCGCC AATGTCTACA TGTATCCGGA AAAGCCGGGA GTGACGGGCA AGCTCAAGAA GTTCGACGTG CTGACCGGCA AGACCGCCTG GGAGGTCCCG GACGCCTATC CGAACTGGAG CGGCACGCTG AACACGGCGG GCGGCCTCGT CTTCTACGGA AGCCTTAACG GCGACTTCCG CGCCGTCGAC CGCGATAACG GCAAAGTGCT TTGGCAGCGC AAGCTCGGCT CCGGCATCAT CGGCAACCCG ATCGCTTACA AGATCAAGGG CCATGAATAT ATCTCGGTGT TCGCGGGCAT CGGCGGCTGG ATCGGCCTGC CGGCGGTGGC GGGCCTCGAT CTCGAAGACA AGTTCGGCGC GATCGGTTCG ACGGCTCTGA CCAAGGTCAT CGGACTGAAC AAGATCCCGC AGGGCGGCGC CCTCTATACG TTCCGAGTGC CGGACAAGGA GGCCACAGCC CACTAG
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Protein sequence | MNLRKSLPWR AAFAGLAMAS LSGAAWAGSD EEIIKNSKNP DLWPGMGQNL GLQRHSELKD INKDNVSNLQ MSWSQSSGAL RGHEGQPVVV DVGGKPMMFF VSAWPNIVQA LDLSDPDNPV QVWSYNKGTD RDVSAVPRAC CDVVNRGVNY ADGKLLFNTL DGFLIALDAK TGQELWVVKH AFPEHGETVT SAPLIAKDKV IVGFGGDEFA ARGRLEAYDL ATGDLAWRCQ SNGTDKDVCL TPDTNKAHPE HGTYGHDIGL SSYPGDEWKR GGGSPWAWYS YDPELGLVYA STGNPGNWSP TTRCGADTDA ECNSGKWDNK WSMTIFARKV DTGEVVWAYQ MTPFDQWDYD GVNENILVDM PNVDGKPVKA LVHFDRNGFA YVLDRTDGNL LRAHKFVTVN WAEKVDLKTG RPVKVPEHSP FKIGVNTQAC PSAMGGKDQQ PASVDPKDPT NFYVPTNNWC MEDEPQARTH TQQGTVYVFA NVYMYPEKPG VTGKLKKFDV LTGKTAWEVP DAYPNWSGTL NTAGGLVFYG SLNGDFRAVD RDNGKVLWQR KLGSGIIGNP IAYKIKGHEY ISVFAGIGGW IGLPAVAGLD LEDKFGAIGS TALTKVIGLN KIPQGGALYT FRVPDKEATA H
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