Gene Msil_3029 details

Gene Information

• Locus tag: Msil_3029
• ID: 7092706
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylocella silvestris BL2
• Kingdom: Bacteria
• Replicon accession: NC_011666
• Strand: +
• Start bp: 3342841
• End bp: 3344658
• Gene Length: 1818 bp
• Protein Length: 605 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 643466339
• Product: GTP-binding protein TypA
• Protein accession: YP_002363301
• Protein GI: 217979154
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 52
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAGCTGC GCAATATCGC TATCATCGCT CACGTTGACC ACGGCAAGAC GACTCTCGTC 
GACCGTCTGC TGCAACAGTC CGGCTCCTTC CGGGAAAACC AGCGCGTCGC CGAACGCGTC 
ATGGATTCGA ACGATCTCGA AAAAGAGCGC GGCATCACGA TCATGGCCAA GGCGACGTCG 
ATCGCTTGGG AAGGCGCGCG CATCAATATT GTCGATACGC CCGGCCATGC CGATTTCGGC 
GGCGAGGTGG AGCGCATTCT GTCGATGGTC GATGGCGCGA TTGTGCTCGT CGACGCCTCT 
GAAGGGCCGA TGCCGCAGAC CAAATTCGTG GTCGGCAAGG CGCTGAAAAT CGGCTTGAAG 
CCGATCGTCG CCGTCAACAA GGTGGATAAG CCCGACGCCC GCATCACGGA AGTGGTCAAT 
GAGGTATTCG ATCTTTTCGC CGCGCTTGAC GCTACCGACG AACAGCTCGA TTTTCCGATT 
CTCTATGGTT CGGCCAAGCA GGGCTGGATG GCCGACAGTC CCGACGGGCC GAAAGACGGC 
ATGGCGCCGC TGTTCGATCT TGTCTTGAAG CATGTTCCGG AGCCCCGCGT CGAAGAGGGC 
GGTTTCCGCA TGCTCGGCAC GCTGCTCGAG GCCAATCCCT ATCTCGGCCG CCTTGTGACC 
GGGCGCGTCT TTGCCGGCTC GATCAAGCCC AATCAGGCCG TCAAGGTGCT GGACCGTAAG 
GGCAATGTCG TCGAGCAGGG CCGCGTCTCC AAGATTCTCG CCTTCCGCGG CATCGAGCGG 
ACGCCCATCG ATGAAGCCGA AGCGGGCGAT ATTATCGCCA TCGCGGGGCT CGAAAAATTC 
AACGTCGCCG ACACGCTGTG CGCGCCGGAA GTCACCGAGC CGCTGCAGGC GCAGCCGATC 
GATCCGCCGA CCCTGTCGAT GACCTTCTCG GTCAATGATT CGCCGCTTGC CGGCACCGAA 
GGCGACAAGG TCACGAGCCG GGTCATCCGC GCGCGCCTCT ATAAGGAGGC CGAAGGCAAT 
GTCGCGCTGA AGATCGAGGA TTCGCCTGGA TCGGATTCCT ACATCGTCTC GGGGCGCGGC 
GAATTGCAGC TCTCGATCCT GATCGAGACT ATGCGCCGCG AGGGCTTCGA GCTCAGCGTG 
TCGCGGCCGA AAGTTGTGTT CCAGAAGGCG GAAGACGGCT CCATTCTGGA GCCCATCGAA 
GAGGTGGTGA TCGACGTCGA CGAGGAGCAT TCCGGCGTCG TCGTGCAGAA GATGGCCGAG 
CGCAAGGCCG AGATGATCGA GATGCGCCCC TCCGGCGGCA ACCGCTTGCG GCTCGTGTTT 
CACGCGCCGA CGCGCGGCCT GATCGGCTAT CAGGGAGAGC TTCTGACGGA CACGCGCGGC 
ACCGCGATCA TGAACCGGCT GTTTCATGAA TATGCGCCGT GGAAGGGCGA GATCGCCGGC 
CGACGCAACG GCGTCCTCAT CTCCAACGAC ACCGGCGAAT CCGTCGCTTA CGCCATGTGG 
AAGCTGGAAG ATCGCGGCCC GATGATGATC GAGCCCGGCT GGAAGGTCTA TCGCGGCATG 
ATCGTCGGCG AGCATACGCG CGAAAACGAT CTCGAAATCA ATGTGCTGAA GGGCAAGCAG 
CTGACCAATA TCCGCGCCGC CGGCAAGGAT GAGGCCGTGC GCCTGACGCC GCCGATCAAG 
ATGACGCTTG AGCGCGCGCT GGCCTATATC GAGGAGGACG AACTCGTCGA AGTGACGCCG 
AAGTCGATCC GGCTGCGCAA GCTGTTCCTT GATCCGAACG ACCGCAAACG CGCGGTCCGG 
ACCAAGGAAA GCGCCTGA 

 

Protein sequence

MKLRNIAIIA HVDHGKTTLV DRLLQQSGSF RENQRVAERV MDSNDLEKER GITIMAKATS 
IAWEGARINI VDTPGHADFG GEVERILSMV DGAIVLVDAS EGPMPQTKFV VGKALKIGLK 
PIVAVNKVDK PDARITEVVN EVFDLFAALD ATDEQLDFPI LYGSAKQGWM ADSPDGPKDG 
MAPLFDLVLK HVPEPRVEEG GFRMLGTLLE ANPYLGRLVT GRVFAGSIKP NQAVKVLDRK 
GNVVEQGRVS KILAFRGIER TPIDEAEAGD IIAIAGLEKF NVADTLCAPE VTEPLQAQPI 
DPPTLSMTFS VNDSPLAGTE GDKVTSRVIR ARLYKEAEGN VALKIEDSPG SDSYIVSGRG 
ELQLSILIET MRREGFELSV SRPKVVFQKA EDGSILEPIE EVVIDVDEEH SGVVVQKMAE 
RKAEMIEMRP SGGNRLRLVF HAPTRGLIGY QGELLTDTRG TAIMNRLFHE YAPWKGEIAG 
RRNGVLISND TGESVAYAMW KLEDRGPMMI EPGWKVYRGM IVGEHTREND LEINVLKGKQ 
LTNIRAAGKD EAVRLTPPIK MTLERALAYI EEDELVEVTP KSIRLRKLFL DPNDRKRAVR 
TKESA