Gene Msil_3002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_3002 
Symbol 
ID7093497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp3316381 
End bp3317388 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content64% 
IMG OID643466313 
ProductAlcohol dehydrogenase zinc-binding domain protein 
Protein accessionYP_002363275 
Protein GI217979128 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.323414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAAG CCATATTCGT CGAAATCGGC GGCGGGTTTG ACCACGTGGT GGTCGGCGCA 
ACCGAGGCCG CCGCGCCAAA AAGCGGCGAA ATCACCGTAA AGCTGCACGC CTGCTCGCTG
AACTACCATG ACTACGTGGT TGTAAGCGGC GTTTGGGGGC CGTCCGAGCG GCGCATCCCC
ATGGCGGACG GCGCCGGCGA AGTCTCCGCG GTCGGCCCCG ATGTGACCGA ATTCGCCGTC
GGCGATCATG TCGTCAGCAC CTTCTTCCCG ACCTGGCTCG AGGACGAGCC GATCGTCGAC
AGCTTTGCCA CGGTTCCCGG CGACGGCGTC GACGGCTACG CGCGCGAGAT CGTCACGCTT
CCGGCGACGG CCTTCACCCA TGCGCCGAAA GGCTACAGCC ACGTCGAAGC GGCGACCTTG
ACCACCGCCG GCCTGACAGC GTGGCGCGCG CTCTTTGTCG ACGACTCGCT CAAACCTGGC
GACGTCGTTC TCGTGCAGGG GACCGGCGGC GTCTCGATCT TTGCGCTGCA ATTTGCAAAG
CTCGCGGGCG CGCGCGTCAT TGCAACCTCG TCGAGTGATG AAAAGCTCGA ACGGCTCAAG
GCGATGGGCG CGGACCATGT GATTAATTAC AAGACCGACT CGGCCTGGGG AGAGACGGCG
CGCCGGCTCA CGGGCGGGCG GGGCGTCGAC CATGTCGTCG AGGTTGGCGG CCCGTTGACG
CTCGAACAAT CTATGACGGC GGCGCGCGTG GGCGGCCATA TTTCGGTGAT CGGCATTCTG
ACCGGCGTCG CCGGCGAGAT CCCGCTGCTG CCGGCGCTGG TCCGGCAATT GCGCCTGCAA
GGATTGATCG TCGGCAGCCG CAAGCATCAA ATCGAGATGA TCCGCGCCAT CGACGCTGCC
GGCATGAAGC CGATCATCGA CAAAAGCTTT GCGCTGGAGG AGATCGTCGC GGCCTTTCGC
CATCAGGAAA GCAACAGGCA TTTCGGCAAG ATCTGCTTGA GCTTTTGA
 
Protein sequence
MAKAIFVEIG GGFDHVVVGA TEAAAPKSGE ITVKLHACSL NYHDYVVVSG VWGPSERRIP 
MADGAGEVSA VGPDVTEFAV GDHVVSTFFP TWLEDEPIVD SFATVPGDGV DGYAREIVTL
PATAFTHAPK GYSHVEAATL TTAGLTAWRA LFVDDSLKPG DVVLVQGTGG VSIFALQFAK
LAGARVIATS SSDEKLERLK AMGADHVINY KTDSAWGETA RRLTGGRGVD HVVEVGGPLT
LEQSMTAARV GGHISVIGIL TGVAGEIPLL PALVRQLRLQ GLIVGSRKHQ IEMIRAIDAA
GMKPIIDKSF ALEEIVAAFR HQESNRHFGK ICLSF