| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2986 |
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| Symbol | |
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| ID | 7093480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 3294217 |
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| End bp | 3295875 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643466296 |
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| Product | putative glutamate synthase (NADPH) small subunit |
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| Protein accession | YP_002363259 |
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| Protein GI | 217979112 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG1144] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.144587 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCGC TGAAGTCCGA TTTCACCCCG GTCGTCGACC TTCTACACGA AAAAGGCGCC
GGTCCTGTCC GCACGCGTCA GCCGCACTAC GTCGACCTTA TGCCGCCTTG CAACAACGCC
TGCCCGGCTG GCGAGAATGT GCAGGCCTGG CTCGATCTGG CGCAGGCTGG AAAATACCGC
GACGCCTGGG AGACGATTTT ACGCGAGAAT CCGTTCCCCG CCGTCCATGG GCGCGTTTGC
TATCATCCCT GCGAGACAGG CTGCAACCGC GCTCAGCTTG ACAGCGCGGT CAGCATTCAC
GCGGTGGAGC GGTTCCTCGG CGATCTGGCG ACGGCGCAGG GCTGGACCCT GCCCGTGACG
GCGGCGCCGA CCGGCAAGCG CATCCTCGTG GTCGGCGGCG GCCCGAGCGG ATTGTCGGCG
AGCTATCATC TTACGCGCTT GGGTCATGAG GTTGAAATTC GTGAAGCGGG GCCGCTGCCC
GGCGGCATGC TGCATTTCGG CATCCCCGCC TATCGGTTGC CACGCGACGT TCTGATGACG
GAGATCCGCC GCATCGAATC CATGGGCGTG AGGATCACGC TCAATCACAA GGTCGAAGAC
GTGCTCGCCG AACAGGCCGA GGGTAAATTT CACGCCGTAT TCATTGCGAT CGGAGCCCAG
ATCGGAAAGC GCATCGACAT CCCGGCGCGC GACGCGGCGC GCGTGATCGA CGCCATCACG
CTGCTTCATC AGGTCGAAAC AGGCGAGCCG CCGCGCCTTG GCCGTCGCGT TGTGATTTAT
GGCGGCGGCA ATACGGCGAT GGATGCGGCC CGCACCGCGC GCCGGCTTGG CGCCGAGGAG
GCGATCATCC TTTACCATCG CGACCGCGCC CACATGGGCG CACAGGCGTT CGAGACCGAC
GAGGCGCTCT CGGAAGGCAT CAAGATCAAA TGGCTCAGTA CGATTAAAGA TATCGGAGAA
GGCGAACTCA CCGTCGAAGT GATGCAGATG GATGAGCAGG GCCATCTGCA ACCGAGCGGG
CGCCTCGAGA CCCTTTCCGC CGATTCCGTC GTCCTGGCCC TGGGTCAGCA GACCGATAGC
GGCTTCCTGC GCAATGTGCC CGGAGTCGCC TTCCTGGCTG GAGGCACAGT CAAGGTGGAC
GACGCCATGA TGACCGGCCG GCCGGGACTT TTCGCCGGCG GCGACATGGT GCCGAGCGAA
CGAACCGTCA CAGCAGCGGT AGGCCACGGG AAGAAGGCCG CACGCCACAT CGACGCGTGG
CTGCGCGGAA AGCCGGTGCA AACCTCCGCG AAACACCCGA TCGTCGACTT CGCTCTGCTC
AACTTGCCCA TATACGCCGA CGCGCCCCGC TCGGTGCAAA CTGAAACAGA AGCGGATCAG
CGGATCAGCC ATGGCTTCGA AGAGACAACA GCCGGGTTGA GCGAAACCGA AGCGCGCTAT
GAGGCGCGGC GCTGTCTCTC TTGCGGCAAC TGCTTCGAGT GCGACCAATG CTATGCCGCC
TGCCCGGAAC AGGCGATCGT CAAGCTGGGG CCGGGCTTGC GCTACCGCTA TGATTTTGAT
CGCTGCACGG GCTGCGCCGT CTGCTACGAG CAGTGTCCCT GCCACGCAAT CGAGATGATC
CCCGAACCCG CCAAAGCCGC GCCGGAGCAA GTGGCATGA
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| Protein sequence | MTALKSDFTP VVDLLHEKGA GPVRTRQPHY VDLMPPCNNA CPAGENVQAW LDLAQAGKYR
DAWETILREN PFPAVHGRVC YHPCETGCNR AQLDSAVSIH AVERFLGDLA TAQGWTLPVT
AAPTGKRILV VGGGPSGLSA SYHLTRLGHE VEIREAGPLP GGMLHFGIPA YRLPRDVLMT
EIRRIESMGV RITLNHKVED VLAEQAEGKF HAVFIAIGAQ IGKRIDIPAR DAARVIDAIT
LLHQVETGEP PRLGRRVVIY GGGNTAMDAA RTARRLGAEE AIILYHRDRA HMGAQAFETD
EALSEGIKIK WLSTIKDIGE GELTVEVMQM DEQGHLQPSG RLETLSADSV VLALGQQTDS
GFLRNVPGVA FLAGGTVKVD DAMMTGRPGL FAGGDMVPSE RTVTAAVGHG KKAARHIDAW
LRGKPVQTSA KHPIVDFALL NLPIYADAPR SVQTETEADQ RISHGFEETT AGLSETEARY
EARRCLSCGN CFECDQCYAA CPEQAIVKLG PGLRYRYDFD RCTGCAVCYE QCPCHAIEMI
PEPAKAAPEQ VA
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