| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2966 |
|---|
| Symbol | |
|---|
| ID | 7093459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 3270588 |
|---|
| End bp | 3271787 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643466275 |
|---|
| Product | radical SAM enzyme, Cfr family |
|---|
| Protein accession | YP_002363239 |
|---|
| Protein GI | 217979092 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
|---|
| TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 0.80573 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCGT CCACTTTGCT TGAAACGCCG GCCGCCGCGG CCGATCACGA TTGCGCCAGC
GCGCCGCGCT CGCTCGCCGG ACTGACCCGA GACGGGCTCG CCGCCGCACT TCTGGAGATC
GGCGCCCCCG AGCGGGAGCT GCGCATGCGC ACGGCGCAGC TCTGGCACTG GATCTATCAT
CGCGGCGCCG GCTCCTTCGA CGACATGCTG AACGTCAGCA AGGTTTTACG CACGCAACTC
GCAGAAAAGT TCACGCTGGC GCGGCCGCAG ATCGTGACCG AGCAAGTTTC AACAGACGGC
ACGCGCAAAT GGCTGATCCG CTTTGCGCCA TCTGCCGAGA GCGATCGCCT CGCCGAAGTC
GAATGCGTCT ATATCCCGGA TGTGGACCGC GGCACGCTCT GCGTCTCGAG CCAGGTCGGC
TGCACGCTGA CCTGCTCCTT CTGCCACACA GGCACACAGA AATTTGTGCG CAATTTAACA
GCGCAAGAGA TTATCGCTCA ATTGATTATA GCCCGCGACA GGATTGGCGA TTTCCCGGGG
CTGGCGCCGC GGGACGGCAA GGGCTCGAAC AGCGGCTCGC GCCTTGTCAC CAATATCGTT
TTCATGGGCA TGGGCGAACC GCTCTACAAT CTCGACAATG TCGTCGACGC GGTATCCGTC
CTGTCCGACG GCGACGGGCT GTCCCTGTCG CGGCGGCGAA TCACGGTTTC GACCGCCGGG
GTCGTCCCAA AGCTTCCGGA GCTTGGTGAA AAGACCGGGG CCATGCTGGC GATCTCGCTG
CACGCCGTGC GCGACGAATT GCGCAACACG CTTGTGCCGC TCAACAAGAA ATATCCGATC
GCCGCGCTTC TGCAAGCCTG CCGCGATTAT CCCGGCGCCT CCAATGCGCG GCGGATCACC
TTCGAATATG TCATGCTGAA GGGGATCAAT GATTCTCCGT CCGACGCGCG CGAGCTGGTG
CGCCTATTGA AAGGCATCCC GGCCAAGATC AATTTGATCC CGTTCAATCC ATGGCCCGGA
ACGGCCTATG AATGTTCGGA CGACGCCGTG ATCGAGAAAT TTTCGGATAT CGTCTTCAAC
GCCGGCTATG CGAGCCCCGT ACGCACGCCG CGCGGGCGCG ACATTCTCGC CGCCTGCGGC
CAGCTGAAAA GCGAGACCGA AAAACTCAGG GCCCGCGCGC TTCTGGTCGC CGGAGACTGA
|
|---|
| Protein sequence | MTSSTLLETP AAAADHDCAS APRSLAGLTR DGLAAALLEI GAPERELRMR TAQLWHWIYH
RGAGSFDDML NVSKVLRTQL AEKFTLARPQ IVTEQVSTDG TRKWLIRFAP SAESDRLAEV
ECVYIPDVDR GTLCVSSQVG CTLTCSFCHT GTQKFVRNLT AQEIIAQLII ARDRIGDFPG
LAPRDGKGSN SGSRLVTNIV FMGMGEPLYN LDNVVDAVSV LSDGDGLSLS RRRITVSTAG
VVPKLPELGE KTGAMLAISL HAVRDELRNT LVPLNKKYPI AALLQACRDY PGASNARRIT
FEYVMLKGIN DSPSDARELV RLLKGIPAKI NLIPFNPWPG TAYECSDDAV IEKFSDIVFN
AGYASPVRTP RGRDILAACG QLKSETEKLR ARALLVAGD
|
|---|
| |