Gene Msil_2949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_2949 
Symbol 
ID7093442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp3250078 
End bp3251226 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content58% 
IMG OID643466258 
ProductABC-2 type transporter 
Protein accessionYP_002363222 
Protein GI217979075 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGC TCAGCAATAT TTTCTGGCTT GGAACGAAAG AGCTGCGGAG CTTCTTTCGC 
GATTTCGTGC TTCTCGGTCT CGTCGTCTAC ACATTTTCAT TTGCGATCTA TGTGCAGGGA
CACAGCAACG CCCAGGAGCT GCACAATGCT TCGGTCGGCG TGGTGGATGA GGACCATTCC
GCATTGTCGC GCCGTATGAT CGCCGCCCTA CTGCCCCCCT ACTTCAAACC GCCCGCGCGG
ATCGCCGAAG GAGACGTCGA CCACCTGATG AACACCGCGG CCTATACCTT CGTCATCGTG
ATCCCGCCGA ACTTCGAGAA AGACGTCCTC GCCGGACGCA GCCCCGCGGC GCAAGTCAAC
ATAGATGCGA CTGCGATGGT GCAGGCAGGC CTTGGCTACG GCTATATCCA GCAAATCCTG
ATGACCGAGA TCGATAATTT CGTGTCCCGC AACGAGGGGC AATTTCAGTC TCGATCGCAA
AATGTCCCAA GGTCGCCAAT CACGCTCGCC GTGCGCGTCG CCTTCAATCC CAATGTCACC
ACAGCCTGGT TCACGGGCGT CATGGGCATC GTCAATAATG TCACCATGCT GGCGATCATT
CTGGCCGGCG CCGCCATCAT TCGCGAGCGC GAGCACGGCA CCATGGATCA CCTGCTCGTT
ATGCCCGTCA CGCCCTTCGA GATCGCAATG GCCAAGATCT GGGCCAATGG GCTTGTGATC
ACCGTCTCAG CCGCCTTGTC GCTCGAGATC GTGGTGCGTC ATTTTCTCAA GATCCCTATC
GCCGGTTCGG CGACTTTATT CGTAGGCGGC GTCGCCATCT ATCTGTTCTT TGCGACGGCC
ATCGGCATTT TTTTAGCCAC GATCGCCCGC ACCATGCCGC AGCTCGGCTT GCTCTACCTC
CTCGTCGCAA TGCCGATGAA CATTCTTTCC GGCAGCAGCA CGCCGCTCGA GTCGATGCCG
CCGATCCTGA GCTCCATCAT GATGTTGTCG CCCTCGACGC ATTTCGTGTC ATTCGCACAA
TCGATCCTCT TTCGCGGCGC GGGGTTCGCT GTGGTGTGGC CGCAATTTCT TTTTGTGGCC
GGCGTCGGCG GTCTTTTCCT GCTGCTCGCT TTGCTGCGCT TTCGCGCCGT GGCGATCCAG
GCTGGTTGA
 
Protein sequence
MNALSNIFWL GTKELRSFFR DFVLLGLVVY TFSFAIYVQG HSNAQELHNA SVGVVDEDHS 
ALSRRMIAAL LPPYFKPPAR IAEGDVDHLM NTAAYTFVIV IPPNFEKDVL AGRSPAAQVN
IDATAMVQAG LGYGYIQQIL MTEIDNFVSR NEGQFQSRSQ NVPRSPITLA VRVAFNPNVT
TAWFTGVMGI VNNVTMLAII LAGAAIIRER EHGTMDHLLV MPVTPFEIAM AKIWANGLVI
TVSAALSLEI VVRHFLKIPI AGSATLFVGG VAIYLFFATA IGIFLATIAR TMPQLGLLYL
LVAMPMNILS GSSTPLESMP PILSSIMMLS PSTHFVSFAQ SILFRGAGFA VVWPQFLFVA
GVGGLFLLLA LLRFRAVAIQ AG